Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
5530400C23RikQ9D3I0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
5530400C23RikQ9D3I0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
5530400C23RikQ9D3I0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
5530400C23RikQ9D3I0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.01■■□□□ 1.11
5530400C23RikQ9D3I0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
5530400C23RikQ9D3I0 Terc-201ENSMUST00000082862 423 ntBASIC22.01■■□□□ 1.11
5530400C23RikQ9D3I0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
5530400C23RikQ9D3I0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22■■□□□ 1.11
5530400C23RikQ9D3I0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
5530400C23RikQ9D3I0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
5530400C23RikQ9D3I0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
5530400C23RikQ9D3I0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
5530400C23RikQ9D3I0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
5530400C23RikQ9D3I0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
5530400C23RikQ9D3I0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
5530400C23RikQ9D3I0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
5530400C23RikQ9D3I0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
5530400C23RikQ9D3I0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.98■■□□□ 1.11
5530400C23RikQ9D3I0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
5530400C23RikQ9D3I0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
5530400C23RikQ9D3I0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
5530400C23RikQ9D3I0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
5530400C23RikQ9D3I0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
5530400C23RikQ9D3I0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.97■■□□□ 1.11
5530400C23RikQ9D3I0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
5530400C23RikQ9D3I0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
5530400C23RikQ9D3I0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.97■■□□□ 1.11
5530400C23RikQ9D3I0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
5530400C23RikQ9D3I0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
5530400C23RikQ9D3I0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
5530400C23RikQ9D3I0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
5530400C23RikQ9D3I0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
5530400C23RikQ9D3I0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.96■■□□□ 1.11
5530400C23RikQ9D3I0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
5530400C23RikQ9D3I0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
5530400C23RikQ9D3I0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
5530400C23RikQ9D3I0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
5530400C23RikQ9D3I0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
5530400C23RikQ9D3I0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
5530400C23RikQ9D3I0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.95■■□□□ 1.1
5530400C23RikQ9D3I0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
5530400C23RikQ9D3I0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
5530400C23RikQ9D3I0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
5530400C23RikQ9D3I0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
5530400C23RikQ9D3I0 Scarna2-201ENSMUST00000157560 414 ntBASIC21.93■■□□□ 1.1
5530400C23RikQ9D3I0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
5530400C23RikQ9D3I0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
5530400C23RikQ9D3I0 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.92■■□□□ 1.1
5530400C23RikQ9D3I0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
5530400C23RikQ9D3I0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
5530400C23RikQ9D3I0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
5530400C23RikQ9D3I0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
5530400C23RikQ9D3I0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
5530400C23RikQ9D3I0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
5530400C23RikQ9D3I0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
5530400C23RikQ9D3I0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.91■■□□□ 1.1
5530400C23RikQ9D3I0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
5530400C23RikQ9D3I0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.9■■□□□ 1.1
5530400C23RikQ9D3I0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
5530400C23RikQ9D3I0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
5530400C23RikQ9D3I0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
5530400C23RikQ9D3I0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
5530400C23RikQ9D3I0 Gm16437-201ENSMUST00000025669 507 ntBASIC21.89■■□□□ 1.09
5530400C23RikQ9D3I0 Gm9806-201ENSMUST00000051080 552 ntBASIC21.89■■□□□ 1.09
5530400C23RikQ9D3I0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
5530400C23RikQ9D3I0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
5530400C23RikQ9D3I0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.88■■□□□ 1.09
5530400C23RikQ9D3I0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
5530400C23RikQ9D3I0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
5530400C23RikQ9D3I0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
5530400C23RikQ9D3I0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.88■■□□□ 1.09
5530400C23RikQ9D3I0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
5530400C23RikQ9D3I0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
5530400C23RikQ9D3I0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
5530400C23RikQ9D3I0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
5530400C23RikQ9D3I0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
5530400C23RikQ9D3I0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
5530400C23RikQ9D3I0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
5530400C23RikQ9D3I0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.86■■□□□ 1.09
5530400C23RikQ9D3I0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
5530400C23RikQ9D3I0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
5530400C23RikQ9D3I0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
5530400C23RikQ9D3I0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
5530400C23RikQ9D3I0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.86■■□□□ 1.09
5530400C23RikQ9D3I0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
5530400C23RikQ9D3I0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
5530400C23RikQ9D3I0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
5530400C23RikQ9D3I0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
5530400C23RikQ9D3I0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
5530400C23RikQ9D3I0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms