Protein–RNA interactions for Protein: Q9D1H6

Ndufaf4, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufaf4Q9D1H6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Ndufaf4Q9D1H6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ndufaf4Q9D1H6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufaf4Q9D1H6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufaf4Q9D1H6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufaf4Q9D1H6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufaf4Q9D1H6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufaf4Q9D1H6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufaf4Q9D1H6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Ndufaf4Q9D1H6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.47■■□□□ 1.03
Ndufaf4Q9D1H6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndufaf4Q9D1H6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.47■■□□□ 1.03
Ndufaf4Q9D1H6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndufaf4Q9D1H6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndufaf4Q9D1H6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufaf4Q9D1H6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufaf4Q9D1H6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ndufaf4Q9D1H6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ndufaf4Q9D1H6 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.45■■□□□ 1.02
Ndufaf4Q9D1H6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ndufaf4Q9D1H6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufaf4Q9D1H6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufaf4Q9D1H6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufaf4Q9D1H6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ndufaf4Q9D1H6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.43■■□□□ 1.02
Ndufaf4Q9D1H6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ndufaf4Q9D1H6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ndufaf4Q9D1H6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ndufaf4Q9D1H6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ndufaf4Q9D1H6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.41■■□□□ 1.02
Ndufaf4Q9D1H6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ndufaf4Q9D1H6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndufaf4Q9D1H6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndufaf4Q9D1H6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Ndufaf4Q9D1H6 Nkain2-201ENSMUST00000092602 558 ntBASIC21.39■■□□□ 1.01
Ndufaf4Q9D1H6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.39■■□□□ 1.01
Ndufaf4Q9D1H6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufaf4Q9D1H6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufaf4Q9D1H6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufaf4Q9D1H6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufaf4Q9D1H6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufaf4Q9D1H6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ndufaf4Q9D1H6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ndufaf4Q9D1H6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufaf4Q9D1H6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufaf4Q9D1H6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufaf4Q9D1H6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufaf4Q9D1H6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufaf4Q9D1H6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ndufaf4Q9D1H6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.37■■□□□ 1.01
Ndufaf4Q9D1H6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufaf4Q9D1H6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufaf4Q9D1H6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufaf4Q9D1H6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufaf4Q9D1H6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufaf4Q9D1H6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufaf4Q9D1H6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufaf4Q9D1H6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufaf4Q9D1H6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufaf4Q9D1H6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ndufaf4Q9D1H6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndufaf4Q9D1H6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.35■■□□□ 1.01
Ndufaf4Q9D1H6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ndufaf4Q9D1H6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndufaf4Q9D1H6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndufaf4Q9D1H6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndufaf4Q9D1H6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ndufaf4Q9D1H6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufaf4Q9D1H6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.32■■□□□ 1
Ndufaf4Q9D1H6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufaf4Q9D1H6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufaf4Q9D1H6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufaf4Q9D1H6 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.32■■□□□ 1
Ndufaf4Q9D1H6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ndufaf4Q9D1H6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufaf4Q9D1H6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufaf4Q9D1H6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.31■■□□□ 1
Ndufaf4Q9D1H6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufaf4Q9D1H6 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.31■■□□□ 1
Ndufaf4Q9D1H6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufaf4Q9D1H6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ndufaf4Q9D1H6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ndufaf4Q9D1H6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.3■■□□□ 1
Ndufaf4Q9D1H6 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.3■■□□□ 1
Ndufaf4Q9D1H6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndufaf4Q9D1H6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ndufaf4Q9D1H6 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.29■■□□□ 1
Ndufaf4Q9D1H6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.29■■□□□ 1
Ndufaf4Q9D1H6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndufaf4Q9D1H6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ndufaf4Q9D1H6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ndufaf4Q9D1H6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ndufaf4Q9D1H6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndufaf4Q9D1H6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndufaf4Q9D1H6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.27■■□□□ 1
Ndufaf4Q9D1H6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.27■■□□□ 1
Ndufaf4Q9D1H6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ndufaf4Q9D1H6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndufaf4Q9D1H6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndufaf4Q9D1H6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms