Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cthrc1Q9D1D6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cthrc1Q9D1D6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.97■□□□□ 0.95
Cthrc1Q9D1D6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.97■□□□□ 0.95
Cthrc1Q9D1D6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.97■□□□□ 0.95
Cthrc1Q9D1D6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cthrc1Q9D1D6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cthrc1Q9D1D6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cthrc1Q9D1D6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cthrc1Q9D1D6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.95■□□□□ 0.95
Cthrc1Q9D1D6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cthrc1Q9D1D6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cthrc1Q9D1D6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cthrc1Q9D1D6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cthrc1Q9D1D6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cthrc1Q9D1D6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cthrc1Q9D1D6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cthrc1Q9D1D6 Gm9806-201ENSMUST00000051080 552 ntBASIC20.94■□□□□ 0.94
Cthrc1Q9D1D6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cthrc1Q9D1D6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cthrc1Q9D1D6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cthrc1Q9D1D6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cthrc1Q9D1D6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cthrc1Q9D1D6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cthrc1Q9D1D6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cthrc1Q9D1D6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cthrc1Q9D1D6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cthrc1Q9D1D6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cthrc1Q9D1D6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cthrc1Q9D1D6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cthrc1Q9D1D6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.92■□□□□ 0.94
Cthrc1Q9D1D6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.92■□□□□ 0.94
Cthrc1Q9D1D6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cthrc1Q9D1D6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cthrc1Q9D1D6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Cthrc1Q9D1D6 Gm11687-201ENSMUST00000118911 886 ntBASIC20.91■□□□□ 0.94
Cthrc1Q9D1D6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cthrc1Q9D1D6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cthrc1Q9D1D6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cthrc1Q9D1D6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cthrc1Q9D1D6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cthrc1Q9D1D6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cthrc1Q9D1D6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Gm16437-201ENSMUST00000025669 507 ntBASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cthrc1Q9D1D6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cthrc1Q9D1D6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cthrc1Q9D1D6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cthrc1Q9D1D6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Cthrc1Q9D1D6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cthrc1Q9D1D6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cthrc1Q9D1D6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cthrc1Q9D1D6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cthrc1Q9D1D6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cthrc1Q9D1D6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cthrc1Q9D1D6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cthrc1Q9D1D6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cthrc1Q9D1D6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cthrc1Q9D1D6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cthrc1Q9D1D6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cthrc1Q9D1D6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cthrc1Q9D1D6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cthrc1Q9D1D6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.86■□□□□ 0.93
Cthrc1Q9D1D6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cthrc1Q9D1D6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.85■□□□□ 0.93
Cthrc1Q9D1D6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cthrc1Q9D1D6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cthrc1Q9D1D6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cthrc1Q9D1D6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cthrc1Q9D1D6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.84■□□□□ 0.93
Cthrc1Q9D1D6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cthrc1Q9D1D6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.84■□□□□ 0.93
Cthrc1Q9D1D6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.84■□□□□ 0.93
Cthrc1Q9D1D6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cthrc1Q9D1D6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cthrc1Q9D1D6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.83■□□□□ 0.93
Cthrc1Q9D1D6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cthrc1Q9D1D6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cthrc1Q9D1D6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cthrc1Q9D1D6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cthrc1Q9D1D6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cthrc1Q9D1D6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cthrc1Q9D1D6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms