Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Raet1eQ9CZQ6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Raet1eQ9CZQ6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Raet1eQ9CZQ6 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.88■□□□□ 0.77
Raet1eQ9CZQ6 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.88■□□□□ 0.77
Raet1eQ9CZQ6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Raet1eQ9CZQ6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.87■□□□□ 0.77
Raet1eQ9CZQ6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Raet1eQ9CZQ6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.87■□□□□ 0.77
Raet1eQ9CZQ6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Raet1eQ9CZQ6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Raet1eQ9CZQ6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Raet1eQ9CZQ6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Raet1eQ9CZQ6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Raet1eQ9CZQ6 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.86■□□□□ 0.77
Raet1eQ9CZQ6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Raet1eQ9CZQ6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Raet1eQ9CZQ6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Raet1eQ9CZQ6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1eQ9CZQ6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1eQ9CZQ6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1eQ9CZQ6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Raet1eQ9CZQ6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Raet1eQ9CZQ6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.84■□□□□ 0.77
Raet1eQ9CZQ6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Raet1eQ9CZQ6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Raet1eQ9CZQ6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Raet1eQ9CZQ6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Raet1eQ9CZQ6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Raet1eQ9CZQ6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Raet1eQ9CZQ6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Raet1eQ9CZQ6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Raet1eQ9CZQ6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
Raet1eQ9CZQ6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1eQ9CZQ6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1eQ9CZQ6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1eQ9CZQ6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Raet1eQ9CZQ6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Raet1eQ9CZQ6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Raet1eQ9CZQ6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.81■□□□□ 0.76
Raet1eQ9CZQ6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Raet1eQ9CZQ6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Raet1eQ9CZQ6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.81■□□□□ 0.76
Raet1eQ9CZQ6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Raet1eQ9CZQ6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Raet1eQ9CZQ6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Raet1eQ9CZQ6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.8■□□□□ 0.76
Raet1eQ9CZQ6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Raet1eQ9CZQ6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Raet1eQ9CZQ6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1eQ9CZQ6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Raet1eQ9CZQ6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1eQ9CZQ6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1eQ9CZQ6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Raet1eQ9CZQ6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.78■□□□□ 0.76
Raet1eQ9CZQ6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Raet1eQ9CZQ6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Raet1eQ9CZQ6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Raet1eQ9CZQ6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Raet1eQ9CZQ6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Raet1eQ9CZQ6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Raet1eQ9CZQ6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Raet1eQ9CZQ6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Raet1eQ9CZQ6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Raet1eQ9CZQ6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Raet1eQ9CZQ6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.76■□□□□ 0.75
Raet1eQ9CZQ6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Raet1eQ9CZQ6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Raet1eQ9CZQ6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Raet1eQ9CZQ6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Raet1eQ9CZQ6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Raet1eQ9CZQ6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Raet1eQ9CZQ6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Raet1eQ9CZQ6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Raet1eQ9CZQ6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Raet1eQ9CZQ6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Raet1eQ9CZQ6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Raet1eQ9CZQ6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Raet1eQ9CZQ6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Raet1eQ9CZQ6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.72■□□□□ 0.75
Raet1eQ9CZQ6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Raet1eQ9CZQ6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Raet1eQ9CZQ6 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.71■□□□□ 0.75
Raet1eQ9CZQ6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Raet1eQ9CZQ6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Raet1eQ9CZQ6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Raet1eQ9CZQ6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.71■□□□□ 0.75
Raet1eQ9CZQ6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Raet1eQ9CZQ6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1eQ9CZQ6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1eQ9CZQ6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1eQ9CZQ6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1eQ9CZQ6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1eQ9CZQ6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Raet1eQ9CZQ6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.68■□□□□ 0.74
Raet1eQ9CZQ6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Raet1eQ9CZQ6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Raet1eQ9CZQ6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Raet1eQ9CZQ6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1eQ9CZQ6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms