Protein–RNA interactions for Protein: Q9CY34

Ube2f, NEDD8-conjugating enzyme UBE2F, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fQ9CY34 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube2fQ9CY34 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.29■□□□□ 0.84
Ube2fQ9CY34 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube2fQ9CY34 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ube2fQ9CY34 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube2fQ9CY34 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ube2fQ9CY34 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube2fQ9CY34 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.28■□□□□ 0.84
Ube2fQ9CY34 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube2fQ9CY34 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube2fQ9CY34 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ube2fQ9CY34 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube2fQ9CY34 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ube2fQ9CY34 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ube2fQ9CY34 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ube2fQ9CY34 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ube2fQ9CY34 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ube2fQ9CY34 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube2fQ9CY34 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube2fQ9CY34 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube2fQ9CY34 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube2fQ9CY34 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube2fQ9CY34 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ube2fQ9CY34 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ube2fQ9CY34 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube2fQ9CY34 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube2fQ9CY34 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube2fQ9CY34 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ube2fQ9CY34 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube2fQ9CY34 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ube2fQ9CY34 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube2fQ9CY34 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.23■□□□□ 0.83
Ube2fQ9CY34 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube2fQ9CY34 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube2fQ9CY34 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube2fQ9CY34 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube2fQ9CY34 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube2fQ9CY34 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.21■□□□□ 0.83
Ube2fQ9CY34 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ube2fQ9CY34 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube2fQ9CY34 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.21■□□□□ 0.83
Ube2fQ9CY34 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ube2fQ9CY34 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.19■□□□□ 0.82
Ube2fQ9CY34 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube2fQ9CY34 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube2fQ9CY34 Gm24970-201ENSMUST00000175582 82 ntBASIC20.19■□□□□ 0.82
Ube2fQ9CY34 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ube2fQ9CY34 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.19■□□□□ 0.82
Ube2fQ9CY34 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube2fQ9CY34 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.19■□□□□ 0.82
Ube2fQ9CY34 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube2fQ9CY34 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ube2fQ9CY34 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ube2fQ9CY34 Gm9397-201ENSMUST00000200125 605 ntBASIC20.17■□□□□ 0.82
Ube2fQ9CY34 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube2fQ9CY34 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ube2fQ9CY34 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ube2fQ9CY34 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ube2fQ9CY34 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.16■□□□□ 0.82
Ube2fQ9CY34 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube2fQ9CY34 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube2fQ9CY34 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ube2fQ9CY34 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ube2fQ9CY34 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Ube2fQ9CY34 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Ube2fQ9CY34 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ube2fQ9CY34 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ube2fQ9CY34 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ube2fQ9CY34 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.13■□□□□ 0.81
Ube2fQ9CY34 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ube2fQ9CY34 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ube2fQ9CY34 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.13■□□□□ 0.81
Ube2fQ9CY34 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ube2fQ9CY34 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ube2fQ9CY34 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ube2fQ9CY34 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ube2fQ9CY34 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ube2fQ9CY34 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ube2fQ9CY34 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ube2fQ9CY34 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ube2fQ9CY34 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ube2fQ9CY34 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms