Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.26■■□□□ 1.31
Ddx47Q9CWX9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.26■■□□□ 1.31
Ddx47Q9CWX9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Ddx47Q9CWX9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx47Q9CWX9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ddx47Q9CWX9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ddx47Q9CWX9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx47Q9CWX9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx47Q9CWX9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx47Q9CWX9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx47Q9CWX9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
Ddx47Q9CWX9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.24■■□□□ 1.31
Ddx47Q9CWX9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Ddx47Q9CWX9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx47Q9CWX9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx47Q9CWX9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx47Q9CWX9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx47Q9CWX9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx47Q9CWX9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx47Q9CWX9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx47Q9CWX9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx47Q9CWX9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx47Q9CWX9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx47Q9CWX9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx47Q9CWX9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx47Q9CWX9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx47Q9CWX9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.21■■□□□ 1.31
Ddx47Q9CWX9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx47Q9CWX9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx47Q9CWX9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ddx47Q9CWX9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Ddx47Q9CWX9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx47Q9CWX9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
Ddx47Q9CWX9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx47Q9CWX9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx47Q9CWX9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ddx47Q9CWX9 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.18■■□□□ 1.3
Ddx47Q9CWX9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ddx47Q9CWX9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx47Q9CWX9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx47Q9CWX9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx47Q9CWX9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx47Q9CWX9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx47Q9CWX9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx47Q9CWX9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx47Q9CWX9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx47Q9CWX9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.15■■□□□ 1.3
Ddx47Q9CWX9 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.15■■□□□ 1.3
Ddx47Q9CWX9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ddx47Q9CWX9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx47Q9CWX9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx47Q9CWX9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ddx47Q9CWX9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.13■■□□□ 1.29
Ddx47Q9CWX9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx47Q9CWX9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ddx47Q9CWX9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx47Q9CWX9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx47Q9CWX9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.12■■□□□ 1.29
Ddx47Q9CWX9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx47Q9CWX9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx47Q9CWX9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx47Q9CWX9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ddx47Q9CWX9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ddx47Q9CWX9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx47Q9CWX9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.11■■□□□ 1.29
Ddx47Q9CWX9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx47Q9CWX9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx47Q9CWX9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Ddx47Q9CWX9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx47Q9CWX9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx47Q9CWX9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.1■■□□□ 1.29
Ddx47Q9CWX9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx47Q9CWX9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx47Q9CWX9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx47Q9CWX9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx47Q9CWX9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Ddx47Q9CWX9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Ddx47Q9CWX9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Ddx47Q9CWX9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx47Q9CWX9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx47Q9CWX9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx47Q9CWX9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx47Q9CWX9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx47Q9CWX9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.06■■□□□ 1.28
Ddx47Q9CWX9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx47Q9CWX9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx47Q9CWX9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ddx47Q9CWX9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx47Q9CWX9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx47Q9CWX9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx47Q9CWX9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.05■■□□□ 1.28
Ddx47Q9CWX9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.05■■□□□ 1.28
Ddx47Q9CWX9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx47Q9CWX9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx47Q9CWX9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.04■■□□□ 1.28
Ddx47Q9CWX9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx47Q9CWX9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx47Q9CWX9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx47Q9CWX9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx47Q9CWX9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms