Protein–RNA interactions for Protein: Q91Y03

Pcdhb16, MCG141291, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb16Q91Y03 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb16Q91Y03 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhb16Q91Y03 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb16Q91Y03 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb16Q91Y03 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhb16Q91Y03 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb16Q91Y03 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb16Q91Y03 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb16Q91Y03 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Pcdhb16Q91Y03 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb16Q91Y03 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb16Q91Y03 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb16Q91Y03 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb16Q91Y03 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb16Q91Y03 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb16Q91Y03 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb16Q91Y03 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb16Q91Y03 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb16Q91Y03 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb16Q91Y03 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb16Q91Y03 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb16Q91Y03 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb16Q91Y03 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb16Q91Y03 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.22■□□□□ 0.99
Pcdhb16Q91Y03 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.22■□□□□ 0.99
Pcdhb16Q91Y03 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb16Q91Y03 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdhb16Q91Y03 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.21■□□□□ 0.99
Pcdhb16Q91Y03 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhb16Q91Y03 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb16Q91Y03 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhb16Q91Y03 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb16Q91Y03 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhb16Q91Y03 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb16Q91Y03 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb16Q91Y03 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb16Q91Y03 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhb16Q91Y03 Terc-201ENSMUST00000082862 423 ntBASIC21.2■□□□□ 0.98
Pcdhb16Q91Y03 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb16Q91Y03 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhb16Q91Y03 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb16Q91Y03 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb16Q91Y03 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.19■□□□□ 0.98
Pcdhb16Q91Y03 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb16Q91Y03 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb16Q91Y03 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb16Q91Y03 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb16Q91Y03 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb16Q91Y03 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb16Q91Y03 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb16Q91Y03 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb16Q91Y03 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdhb16Q91Y03 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb16Q91Y03 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Pcdhb16Q91Y03 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb16Q91Y03 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb16Q91Y03 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb16Q91Y03 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb16Q91Y03 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb16Q91Y03 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb16Q91Y03 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb16Q91Y03 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb16Q91Y03 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb16Q91Y03 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhb16Q91Y03 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb16Q91Y03 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb16Q91Y03 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb16Q91Y03 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Pcdhb16Q91Y03 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.14■□□□□ 0.98
Pcdhb16Q91Y03 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb16Q91Y03 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb16Q91Y03 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb16Q91Y03 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb16Q91Y03 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb16Q91Y03 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb16Q91Y03 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb16Q91Y03 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb16Q91Y03 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb16Q91Y03 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb16Q91Y03 Gm9806-201ENSMUST00000051080 552 ntBASIC21.12■□□□□ 0.97
Pcdhb16Q91Y03 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb16Q91Y03 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Scarna2-201ENSMUST00000157560 414 ntBASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.11■□□□□ 0.97
Pcdhb16Q91Y03 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.1■□□□□ 0.97
Pcdhb16Q91Y03 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhb16Q91Y03 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb16Q91Y03 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhb16Q91Y03 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb16Q91Y03 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb16Q91Y03 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms