Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb20Q91XZ9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb20Q91XZ9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb20Q91XZ9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb20Q91XZ9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb20Q91XZ9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb20Q91XZ9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhb20Q91XZ9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb20Q91XZ9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb20Q91XZ9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhb20Q91XZ9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb20Q91XZ9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.62■■□□□ 1.05
Pcdhb20Q91XZ9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb20Q91XZ9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb20Q91XZ9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Pcdhb20Q91XZ9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb20Q91XZ9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.6■■□□□ 1.05
Pcdhb20Q91XZ9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb20Q91XZ9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.6■■□□□ 1.05
Pcdhb20Q91XZ9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.59■■□□□ 1.05
Pcdhb20Q91XZ9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb20Q91XZ9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb20Q91XZ9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb20Q91XZ9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb20Q91XZ9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb20Q91XZ9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb20Q91XZ9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb20Q91XZ9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhb20Q91XZ9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.57■■□□□ 1.04
Pcdhb20Q91XZ9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb20Q91XZ9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Pcdhb20Q91XZ9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb20Q91XZ9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb20Q91XZ9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhb20Q91XZ9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb20Q91XZ9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb20Q91XZ9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb20Q91XZ9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb20Q91XZ9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhb20Q91XZ9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhb20Q91XZ9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdhb20Q91XZ9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
Pcdhb20Q91XZ9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.54■■□□□ 1.04
Pcdhb20Q91XZ9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb20Q91XZ9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb20Q91XZ9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhb20Q91XZ9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhb20Q91XZ9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb20Q91XZ9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb20Q91XZ9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhb20Q91XZ9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb20Q91XZ9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.52■■□□□ 1.04
Pcdhb20Q91XZ9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdhb20Q91XZ9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb20Q91XZ9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb20Q91XZ9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb20Q91XZ9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb20Q91XZ9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdhb20Q91XZ9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb20Q91XZ9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb20Q91XZ9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhb20Q91XZ9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb20Q91XZ9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdhb20Q91XZ9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb20Q91XZ9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb20Q91XZ9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb20Q91XZ9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcdhb20Q91XZ9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb20Q91XZ9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb20Q91XZ9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.47■■□□□ 1.03
Pcdhb20Q91XZ9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb20Q91XZ9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pcdhb20Q91XZ9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.46■■□□□ 1.03
Pcdhb20Q91XZ9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.46■■□□□ 1.03
Pcdhb20Q91XZ9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.46■■□□□ 1.03
Pcdhb20Q91XZ9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb20Q91XZ9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb20Q91XZ9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdhb20Q91XZ9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb20Q91XZ9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb20Q91XZ9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb20Q91XZ9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb20Q91XZ9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb20Q91XZ9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb20Q91XZ9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb20Q91XZ9 Gm42790-201ENSMUST00000201268 969 ntBASIC21.43■■□□□ 1.02
Pcdhb20Q91XZ9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb20Q91XZ9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb20Q91XZ9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb20Q91XZ9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb20Q91XZ9 Gm10420-201ENSMUST00000121713 882 ntBASIC21.42■■□□□ 1.02
Pcdhb20Q91XZ9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhb20Q91XZ9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb20Q91XZ9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb20Q91XZ9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb20Q91XZ9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb20Q91XZ9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb20Q91XZ9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb20Q91XZ9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb20Q91XZ9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms