Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb6Q91XZ4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb6Q91XZ4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.2■■□□□ 1.3
Pcdhb6Q91XZ4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb6Q91XZ4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb6Q91XZ4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb6Q91XZ4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb6Q91XZ4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.18■■□□□ 1.3
Pcdhb6Q91XZ4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb6Q91XZ4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb6Q91XZ4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb6Q91XZ4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb6Q91XZ4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Pcdhb6Q91XZ4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.17■■□□□ 1.3
Pcdhb6Q91XZ4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb6Q91XZ4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.17■■□□□ 1.3
Pcdhb6Q91XZ4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb6Q91XZ4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb6Q91XZ4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.16■■□□□ 1.3
Pcdhb6Q91XZ4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb6Q91XZ4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.16■■□□□ 1.3
Pcdhb6Q91XZ4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Pcdhb6Q91XZ4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb6Q91XZ4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb6Q91XZ4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb6Q91XZ4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.14■■□□□ 1.3
Pcdhb6Q91XZ4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Pcdhb6Q91XZ4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb6Q91XZ4 Gm6311-201ENSMUST00000073790 878 ntBASIC23.14■■□□□ 1.29
Pcdhb6Q91XZ4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb6Q91XZ4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb6Q91XZ4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb6Q91XZ4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb6Q91XZ4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb6Q91XZ4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb6Q91XZ4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Pcdhb6Q91XZ4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.13■■□□□ 1.29
Pcdhb6Q91XZ4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb6Q91XZ4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb6Q91XZ4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Pcdhb6Q91XZ4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb6Q91XZ4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhb6Q91XZ4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb6Q91XZ4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb6Q91XZ4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb6Q91XZ4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Pcdhb6Q91XZ4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb6Q91XZ4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.11■■□□□ 1.29
Pcdhb6Q91XZ4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb6Q91XZ4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Pcdhb6Q91XZ4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb6Q91XZ4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb6Q91XZ4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.1■■□□□ 1.29
Pcdhb6Q91XZ4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb6Q91XZ4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb6Q91XZ4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb6Q91XZ4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb6Q91XZ4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb6Q91XZ4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb6Q91XZ4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhb6Q91XZ4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb6Q91XZ4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb6Q91XZ4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb6Q91XZ4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb6Q91XZ4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Pcdhb6Q91XZ4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.08■■□□□ 1.29
Pcdhb6Q91XZ4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb6Q91XZ4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb6Q91XZ4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb6Q91XZ4 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.07■■□□□ 1.28
Pcdhb6Q91XZ4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb6Q91XZ4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pcdhb6Q91XZ4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Pcdhb6Q91XZ4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb6Q91XZ4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.06■■□□□ 1.28
Pcdhb6Q91XZ4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb6Q91XZ4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb6Q91XZ4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb6Q91XZ4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdhb6Q91XZ4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb6Q91XZ4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb6Q91XZ4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb6Q91XZ4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Pcdhb6Q91XZ4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.04■■□□□ 1.28
Pcdhb6Q91XZ4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb6Q91XZ4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb6Q91XZ4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Pcdhb6Q91XZ4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb6Q91XZ4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb6Q91XZ4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb6Q91XZ4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb6Q91XZ4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms