Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb4Q91XX6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb4Q91XX6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb4Q91XX6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb4Q91XX6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb4Q91XX6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.79■■□□□ 1.4
Pcdhgb4Q91XX6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.79■■□□□ 1.4
Pcdhgb4Q91XX6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.79■■□□□ 1.4
Pcdhgb4Q91XX6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb4Q91XX6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Pcdhgb4Q91XX6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.77■■□□□ 1.4
Pcdhgb4Q91XX6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhgb4Q91XX6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Pcdhgb4Q91XX6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Pcdhgb4Q91XX6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhgb4Q91XX6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhgb4Q91XX6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Pcdhgb4Q91XX6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhgb4Q91XX6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhgb4Q91XX6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhgb4Q91XX6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdhgb4Q91XX6 Mir3960-201ENSMUST00000198213 73 ntBASIC23.74■■□□□ 1.39
Pcdhgb4Q91XX6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Pcdhgb4Q91XX6 Gm45364-201ENSMUST00000210883 159 ntBASIC23.73■■□□□ 1.39
Pcdhgb4Q91XX6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhgb4Q91XX6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhgb4Q91XX6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.72■■□□□ 1.39
Pcdhgb4Q91XX6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb4Q91XX6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhgb4Q91XX6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.7■■□□□ 1.39
Pcdhgb4Q91XX6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhgb4Q91XX6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhgb4Q91XX6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhgb4Q91XX6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Gm9812-201ENSMUST00000061934 968 ntBASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Pcdhgb4Q91XX6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Pcdhgb4Q91XX6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhgb4Q91XX6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhgb4Q91XX6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhgb4Q91XX6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb4Q91XX6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb4Q91XX6 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.67■■□□□ 1.38
Pcdhgb4Q91XX6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb4Q91XX6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb4Q91XX6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb4Q91XX6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhgb4Q91XX6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.66■■□□□ 1.38
Pcdhgb4Q91XX6 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.66■■□□□ 1.38
Pcdhgb4Q91XX6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.66■■□□□ 1.38
Pcdhgb4Q91XX6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdhgb4Q91XX6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhgb4Q91XX6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdhgb4Q91XX6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhgb4Q91XX6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhgb4Q91XX6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.64■■□□□ 1.38
Pcdhgb4Q91XX6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.64■■□□□ 1.37
Pcdhgb4Q91XX6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhgb4Q91XX6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.64■■□□□ 1.37
Pcdhgb4Q91XX6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhgb4Q91XX6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
Pcdhgb4Q91XX6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhgb4Q91XX6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhgb4Q91XX6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.62■■□□□ 1.37
Pcdhgb4Q91XX6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Pcdhgb4Q91XX6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb4Q91XX6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb4Q91XX6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb4Q91XX6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb4Q91XX6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb4Q91XX6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Pcdhgb4Q91XX6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.59■■□□□ 1.37
Pcdhgb4Q91XX6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb4Q91XX6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb4Q91XX6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb4Q91XX6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhgb4Q91XX6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhgb4Q91XX6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhgb4Q91XX6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Pcdhgb4Q91XX6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Pcdhgb4Q91XX6 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.57■■□□□ 1.36
Pcdhgb4Q91XX6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Pcdhgb4Q91XX6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms