Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tram1Q91V04 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tram1Q91V04 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tram1Q91V04 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.37■□□□□ 0.69
Tram1Q91V04 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tram1Q91V04 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tram1Q91V04 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tram1Q91V04 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.37■□□□□ 0.69
Tram1Q91V04 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tram1Q91V04 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tram1Q91V04 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.36■□□□□ 0.69
Tram1Q91V04 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tram1Q91V04 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tram1Q91V04 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tram1Q91V04 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tram1Q91V04 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tram1Q91V04 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tram1Q91V04 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tram1Q91V04 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tram1Q91V04 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tram1Q91V04 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tram1Q91V04 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tram1Q91V04 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tram1Q91V04 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.33■□□□□ 0.69
Tram1Q91V04 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tram1Q91V04 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.33■□□□□ 0.68
Tram1Q91V04 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.33■□□□□ 0.68
Tram1Q91V04 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tram1Q91V04 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tram1Q91V04 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tram1Q91V04 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tram1Q91V04 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tram1Q91V04 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tram1Q91V04 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tram1Q91V04 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.31■□□□□ 0.68
Tram1Q91V04 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tram1Q91V04 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tram1Q91V04 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tram1Q91V04 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tram1Q91V04 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tram1Q91V04 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tram1Q91V04 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tram1Q91V04 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.31■□□□□ 0.68
Tram1Q91V04 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tram1Q91V04 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.3■□□□□ 0.68
Tram1Q91V04 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tram1Q91V04 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tram1Q91V04 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tram1Q91V04 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tram1Q91V04 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.29■□□□□ 0.68
Tram1Q91V04 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tram1Q91V04 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tram1Q91V04 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tram1Q91V04 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tram1Q91V04 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tram1Q91V04 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tram1Q91V04 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tram1Q91V04 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tram1Q91V04 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tram1Q91V04 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tram1Q91V04 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tram1Q91V04 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tram1Q91V04 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tram1Q91V04 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tram1Q91V04 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tram1Q91V04 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tram1Q91V04 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tram1Q91V04 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tram1Q91V04 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tram1Q91V04 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tram1Q91V04 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tram1Q91V04 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tram1Q91V04 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tram1Q91V04 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tram1Q91V04 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tram1Q91V04 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Tram1Q91V04 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tram1Q91V04 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tram1Q91V04 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tram1Q91V04 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tram1Q91V04 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tram1Q91V04 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tram1Q91V04 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tram1Q91V04 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tram1Q91V04 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tram1Q91V04 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tram1Q91V04 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tram1Q91V04 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tram1Q91V04 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tram1Q91V04 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tram1Q91V04 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tram1Q91V04 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tram1Q91V04 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tram1Q91V04 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tram1Q91V04 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tram1Q91V04 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tram1Q91V04 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tram1Q91V04 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tram1Q91V04 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tram1Q91V04 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms