Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atxn7Q8R4I1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Atxn7Q8R4I1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atxn7Q8R4I1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Atxn7Q8R4I1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atxn7Q8R4I1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Atxn7Q8R4I1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Atxn7Q8R4I1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Atxn7Q8R4I1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Atxn7Q8R4I1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Atxn7Q8R4I1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atxn7Q8R4I1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.47■■□□□ 1.83
Atxn7Q8R4I1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Atxn7Q8R4I1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atxn7Q8R4I1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Atxn7Q8R4I1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Atxn7Q8R4I1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atxn7Q8R4I1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Atxn7Q8R4I1 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.46■■□□□ 1.83
Atxn7Q8R4I1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Atxn7Q8R4I1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Atxn7Q8R4I1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Atxn7Q8R4I1 Gm13238-201ENSMUST00000117655 780 ntBASIC26.45■■□□□ 1.82
Atxn7Q8R4I1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Atxn7Q8R4I1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Atxn7Q8R4I1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Atxn7Q8R4I1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Atxn7Q8R4I1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Atxn7Q8R4I1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Atxn7Q8R4I1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Atxn7Q8R4I1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.43■■□□□ 1.82
Atxn7Q8R4I1 Gm15546-201ENSMUST00000122095 826 ntBASIC26.43■■□□□ 1.82
Atxn7Q8R4I1 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.42■■□□□ 1.82
Atxn7Q8R4I1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.42■■□□□ 1.82
Atxn7Q8R4I1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Atxn7Q8R4I1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.41■■□□□ 1.82
Atxn7Q8R4I1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Atxn7Q8R4I1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atxn7Q8R4I1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.4■■□□□ 1.82
Atxn7Q8R4I1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atxn7Q8R4I1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Atxn7Q8R4I1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Atxn7Q8R4I1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Atxn7Q8R4I1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.38■■□□□ 1.81
Atxn7Q8R4I1 Gm22567-201ENSMUST00000175542 342 ntBASIC26.38■■□□□ 1.81
Atxn7Q8R4I1 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.38■■□□□ 1.81
Atxn7Q8R4I1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Atxn7Q8R4I1 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.37■■□□□ 1.81
Atxn7Q8R4I1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Atxn7Q8R4I1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Atxn7Q8R4I1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.36■■□□□ 1.81
Atxn7Q8R4I1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Atxn7Q8R4I1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atxn7Q8R4I1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atxn7Q8R4I1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Atxn7Q8R4I1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.35■■□□□ 1.81
Atxn7Q8R4I1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
Atxn7Q8R4I1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atxn7Q8R4I1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atxn7Q8R4I1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atxn7Q8R4I1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Atxn7Q8R4I1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.33■■□□□ 1.81
Atxn7Q8R4I1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Atxn7Q8R4I1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Atxn7Q8R4I1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.32■■□□□ 1.8
Atxn7Q8R4I1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.32■■□□□ 1.8
Atxn7Q8R4I1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Atxn7Q8R4I1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Atxn7Q8R4I1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atxn7Q8R4I1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atxn7Q8R4I1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atxn7Q8R4I1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
Atxn7Q8R4I1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atxn7Q8R4I1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Atxn7Q8R4I1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Atxn7Q8R4I1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atxn7Q8R4I1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atxn7Q8R4I1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Atxn7Q8R4I1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.28■■□□□ 1.8
Atxn7Q8R4I1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atxn7Q8R4I1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.28■■□□□ 1.8
Atxn7Q8R4I1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.28■■□□□ 1.8
Atxn7Q8R4I1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Atxn7Q8R4I1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atxn7Q8R4I1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atxn7Q8R4I1 Gm43566-201ENSMUST00000196851 808 ntBASIC26.27■■□□□ 1.8
Atxn7Q8R4I1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atxn7Q8R4I1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Atxn7Q8R4I1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Atxn7Q8R4I1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atxn7Q8R4I1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atxn7Q8R4I1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.25■■□□□ 1.79
Atxn7Q8R4I1 Gm45444-201ENSMUST00000211394 898 ntBASIC26.25■■□□□ 1.79
Atxn7Q8R4I1 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.25■■□□□ 1.79
Atxn7Q8R4I1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Atxn7Q8R4I1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.25■■□□□ 1.79
Atxn7Q8R4I1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Atxn7Q8R4I1 Gm15820-201ENSMUST00000201566 728 ntBASIC26.24■■□□□ 1.79
Atxn7Q8R4I1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Atxn7Q8R4I1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms