Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lrrc42Q8R2U7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Lrrc42Q8R2U7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Lrrc42Q8R2U7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.36■■□□□ 1.33
Lrrc42Q8R2U7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lrrc42Q8R2U7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.36■■□□□ 1.33
Lrrc42Q8R2U7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Lrrc42Q8R2U7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Lrrc42Q8R2U7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.35■■□□□ 1.33
Lrrc42Q8R2U7 Gm4799-201ENSMUST00000095396 657 ntBASIC23.35■■□□□ 1.33
Lrrc42Q8R2U7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Lrrc42Q8R2U7 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.34■■□□□ 1.33
Lrrc42Q8R2U7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Lrrc42Q8R2U7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Lrrc42Q8R2U7 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.34■■□□□ 1.33
Lrrc42Q8R2U7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Lrrc42Q8R2U7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lrrc42Q8R2U7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Lrrc42Q8R2U7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Lrrc42Q8R2U7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.32■■□□□ 1.32
Lrrc42Q8R2U7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Lrrc42Q8R2U7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Lrrc42Q8R2U7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lrrc42Q8R2U7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Lrrc42Q8R2U7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.31■■□□□ 1.32
Lrrc42Q8R2U7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lrrc42Q8R2U7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lrrc42Q8R2U7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lrrc42Q8R2U7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.31■■□□□ 1.32
Lrrc42Q8R2U7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lrrc42Q8R2U7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lrrc42Q8R2U7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lrrc42Q8R2U7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Lrrc42Q8R2U7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrc42Q8R2U7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrc42Q8R2U7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrc42Q8R2U7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrc42Q8R2U7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrc42Q8R2U7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrc42Q8R2U7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrc42Q8R2U7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrrc42Q8R2U7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrrc42Q8R2U7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrrc42Q8R2U7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrrc42Q8R2U7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.28■■□□□ 1.32
Lrrc42Q8R2U7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrrc42Q8R2U7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Lrrc42Q8R2U7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lrrc42Q8R2U7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Lrrc42Q8R2U7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Lrrc42Q8R2U7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Lrrc42Q8R2U7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Lrrc42Q8R2U7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Lrrc42Q8R2U7 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.26■■□□□ 1.31
Lrrc42Q8R2U7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrc42Q8R2U7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrc42Q8R2U7 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.25■■□□□ 1.31
Lrrc42Q8R2U7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrc42Q8R2U7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.25■■□□□ 1.31
Lrrc42Q8R2U7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrc42Q8R2U7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrc42Q8R2U7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrc42Q8R2U7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrc42Q8R2U7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Lrrc42Q8R2U7 Gm6311-201ENSMUST00000073790 878 ntBASIC23.24■■□□□ 1.31
Lrrc42Q8R2U7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrc42Q8R2U7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrc42Q8R2U7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Lrrc42Q8R2U7 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.23■■□□□ 1.31
Lrrc42Q8R2U7 Mir3960-201ENSMUST00000198213 73 ntBASIC23.23■■□□□ 1.31
Lrrc42Q8R2U7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.23■■□□□ 1.31
Lrrc42Q8R2U7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Lrrc42Q8R2U7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lrrc42Q8R2U7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrc42Q8R2U7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrc42Q8R2U7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrc42Q8R2U7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrc42Q8R2U7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Lrrc42Q8R2U7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrc42Q8R2U7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrc42Q8R2U7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrc42Q8R2U7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lrrc42Q8R2U7 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.21■■□□□ 1.31
Lrrc42Q8R2U7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.21■■□□□ 1.31
Lrrc42Q8R2U7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.21■■□□□ 1.31
Lrrc42Q8R2U7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
Lrrc42Q8R2U7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Lrrc42Q8R2U7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lrrc42Q8R2U7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Lrrc42Q8R2U7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.2■■□□□ 1.3
Lrrc42Q8R2U7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.2■■□□□ 1.3
Lrrc42Q8R2U7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Lrrc42Q8R2U7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.19■■□□□ 1.3
Lrrc42Q8R2U7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Lrrc42Q8R2U7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lrrc42Q8R2U7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lrrc42Q8R2U7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lrrc42Q8R2U7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lrrc42Q8R2U7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lrrc42Q8R2U7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms