Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r28Q8R2C9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vmn1r28Q8R2C9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r28Q8R2C9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r28Q8R2C9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r28Q8R2C9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.66■□□□□ 0.9
Vmn1r28Q8R2C9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r28Q8R2C9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r28Q8R2C9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Vmn1r28Q8R2C9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r28Q8R2C9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.65■□□□□ 0.9
Vmn1r28Q8R2C9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.65■□□□□ 0.9
Vmn1r28Q8R2C9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r28Q8R2C9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
Vmn1r28Q8R2C9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Vmn1r28Q8R2C9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.64■□□□□ 0.9
Vmn1r28Q8R2C9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vmn1r28Q8R2C9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vmn1r28Q8R2C9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vmn1r28Q8R2C9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.64■□□□□ 0.89
Vmn1r28Q8R2C9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vmn1r28Q8R2C9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r28Q8R2C9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r28Q8R2C9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r28Q8R2C9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.63■□□□□ 0.89
Vmn1r28Q8R2C9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r28Q8R2C9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.62■□□□□ 0.89
Vmn1r28Q8R2C9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r28Q8R2C9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vmn1r28Q8R2C9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vmn1r28Q8R2C9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r28Q8R2C9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r28Q8R2C9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Vmn1r28Q8R2C9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r28Q8R2C9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.58■□□□□ 0.89
Vmn1r28Q8R2C9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.58■□□□□ 0.89
Vmn1r28Q8R2C9 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.58■□□□□ 0.89
Vmn1r28Q8R2C9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vmn1r28Q8R2C9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vmn1r28Q8R2C9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r28Q8R2C9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r28Q8R2C9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r28Q8R2C9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r28Q8R2C9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r28Q8R2C9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.57■□□□□ 0.88
Vmn1r28Q8R2C9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r28Q8R2C9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r28Q8R2C9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r28Q8R2C9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.56■□□□□ 0.88
Vmn1r28Q8R2C9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r28Q8R2C9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.56■□□□□ 0.88
Vmn1r28Q8R2C9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r28Q8R2C9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r28Q8R2C9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r28Q8R2C9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Vmn1r28Q8R2C9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r28Q8R2C9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vmn1r28Q8R2C9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r28Q8R2C9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r28Q8R2C9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r28Q8R2C9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r28Q8R2C9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r28Q8R2C9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r28Q8R2C9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r28Q8R2C9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r28Q8R2C9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Vmn1r28Q8R2C9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r28Q8R2C9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r28Q8R2C9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Vmn1r28Q8R2C9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Gm44428-201ENSMUST00000204474 874 ntBASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r28Q8R2C9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.49■□□□□ 0.87
Vmn1r28Q8R2C9 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.49■□□□□ 0.87
Vmn1r28Q8R2C9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r28Q8R2C9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r28Q8R2C9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.49■□□□□ 0.87
Vmn1r28Q8R2C9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r28Q8R2C9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r28Q8R2C9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r28Q8R2C9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms