Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.6■■□□□ 1.53
Vopp1Q8R1C3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vopp1Q8R1C3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.59■■□□□ 1.53
Vopp1Q8R1C3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.59■■□□□ 1.53
Vopp1Q8R1C3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.59■■□□□ 1.53
Vopp1Q8R1C3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Vopp1Q8R1C3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Vopp1Q8R1C3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.58■■□□□ 1.53
Vopp1Q8R1C3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Vopp1Q8R1C3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Vopp1Q8R1C3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Vopp1Q8R1C3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Vopp1Q8R1C3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Vopp1Q8R1C3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vopp1Q8R1C3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vopp1Q8R1C3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vopp1Q8R1C3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Vopp1Q8R1C3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Vopp1Q8R1C3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Vopp1Q8R1C3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vopp1Q8R1C3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vopp1Q8R1C3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vopp1Q8R1C3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.54■■□□□ 1.52
Vopp1Q8R1C3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vopp1Q8R1C3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vopp1Q8R1C3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vopp1Q8R1C3 Gm5921-201ENSMUST00000075898 882 ntBASIC24.52■■□□□ 1.52
Vopp1Q8R1C3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Vopp1Q8R1C3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Vopp1Q8R1C3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Vopp1Q8R1C3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Vopp1Q8R1C3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Vopp1Q8R1C3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Vopp1Q8R1C3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Vopp1Q8R1C3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vopp1Q8R1C3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Vopp1Q8R1C3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Vopp1Q8R1C3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.47■■□□□ 1.51
Vopp1Q8R1C3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Vopp1Q8R1C3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vopp1Q8R1C3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Vopp1Q8R1C3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vopp1Q8R1C3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.46■■□□□ 1.51
Vopp1Q8R1C3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.46■■□□□ 1.51
Vopp1Q8R1C3 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.46■■□□□ 1.51
Vopp1Q8R1C3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vopp1Q8R1C3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vopp1Q8R1C3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Vopp1Q8R1C3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.45■■□□□ 1.51
Vopp1Q8R1C3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Vopp1Q8R1C3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Vopp1Q8R1C3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Vopp1Q8R1C3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vopp1Q8R1C3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.43■■□□□ 1.5
Vopp1Q8R1C3 Gm13238-201ENSMUST00000117655 780 ntBASIC24.43■■□□□ 1.5
Vopp1Q8R1C3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Vopp1Q8R1C3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Vopp1Q8R1C3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Vopp1Q8R1C3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Vopp1Q8R1C3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vopp1Q8R1C3 Gm5812-201ENSMUST00000061073 957 ntBASIC24.41■■□□□ 1.5
Vopp1Q8R1C3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vopp1Q8R1C3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Vopp1Q8R1C3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Vopp1Q8R1C3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Vopp1Q8R1C3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Vopp1Q8R1C3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Vopp1Q8R1C3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Vopp1Q8R1C3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Vopp1Q8R1C3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.39■■□□□ 1.49
Vopp1Q8R1C3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Vopp1Q8R1C3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.39■■□□□ 1.49
Vopp1Q8R1C3 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.39■■□□□ 1.49
Vopp1Q8R1C3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Vopp1Q8R1C3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vopp1Q8R1C3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vopp1Q8R1C3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.38■■□□□ 1.49
Vopp1Q8R1C3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vopp1Q8R1C3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vopp1Q8R1C3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vopp1Q8R1C3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vopp1Q8R1C3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Vopp1Q8R1C3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vopp1Q8R1C3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.37■■□□□ 1.49
Vopp1Q8R1C3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vopp1Q8R1C3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Vopp1Q8R1C3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Vopp1Q8R1C3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Vopp1Q8R1C3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Vopp1Q8R1C3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vopp1Q8R1C3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Vopp1Q8R1C3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vopp1Q8R1C3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.35■■□□□ 1.49
Vopp1Q8R1C3 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.34■■□□□ 1.49
Vopp1Q8R1C3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.34■■□□□ 1.49
Vopp1Q8R1C3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Vopp1Q8R1C3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Vopp1Q8R1C3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
Vopp1Q8R1C3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vopp1Q8R1C3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms