Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm6821-201ENSMUST00000107540 542 ntBASIC20.06■□□□□ 0.8
ShfQ8CG80 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShfQ8CG80 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ShfQ8CG80 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ShfQ8CG80 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ShfQ8CG80 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ShfQ8CG80 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.05■□□□□ 0.8
ShfQ8CG80 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ShfQ8CG80 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShfQ8CG80 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShfQ8CG80 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShfQ8CG80 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShfQ8CG80 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.04■□□□□ 0.8
ShfQ8CG80 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.04■□□□□ 0.8
ShfQ8CG80 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShfQ8CG80 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ShfQ8CG80 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShfQ8CG80 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShfQ8CG80 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShfQ8CG80 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ShfQ8CG80 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShfQ8CG80 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShfQ8CG80 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ShfQ8CG80 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShfQ8CG80 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShfQ8CG80 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ShfQ8CG80 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.02■□□□□ 0.8
ShfQ8CG80 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShfQ8CG80 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShfQ8CG80 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShfQ8CG80 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ShfQ8CG80 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ShfQ8CG80 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ShfQ8CG80 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShfQ8CG80 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShfQ8CG80 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.01■□□□□ 0.79
ShfQ8CG80 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShfQ8CG80 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShfQ8CG80 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShfQ8CG80 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20■□□□□ 0.79
ShfQ8CG80 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20■□□□□ 0.79
ShfQ8CG80 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ShfQ8CG80 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShfQ8CG80 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20■□□□□ 0.79
ShfQ8CG80 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShfQ8CG80 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20■□□□□ 0.79
ShfQ8CG80 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ShfQ8CG80 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShfQ8CG80 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ShfQ8CG80 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ShfQ8CG80 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
ShfQ8CG80 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShfQ8CG80 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ShfQ8CG80 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.99■□□□□ 0.79
ShfQ8CG80 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShfQ8CG80 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ShfQ8CG80 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.98■□□□□ 0.79
ShfQ8CG80 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.98■□□□□ 0.79
ShfQ8CG80 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ShfQ8CG80 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShfQ8CG80 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ShfQ8CG80 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShfQ8CG80 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShfQ8CG80 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.96■□□□□ 0.79
ShfQ8CG80 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
ShfQ8CG80 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ShfQ8CG80 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.96■□□□□ 0.79
ShfQ8CG80 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.96■□□□□ 0.79
ShfQ8CG80 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.96■□□□□ 0.79
ShfQ8CG80 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ShfQ8CG80 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ShfQ8CG80 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShfQ8CG80 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShfQ8CG80 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShfQ8CG80 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.95■□□□□ 0.78
ShfQ8CG80 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
ShfQ8CG80 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShfQ8CG80 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShfQ8CG80 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShfQ8CG80 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ShfQ8CG80 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
ShfQ8CG80 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShfQ8CG80 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ShfQ8CG80 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShfQ8CG80 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShfQ8CG80 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ShfQ8CG80 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.93■□□□□ 0.78
ShfQ8CG80 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShfQ8CG80 Gm8503-201ENSMUST00000118131 455 ntBASIC19.93■□□□□ 0.78
ShfQ8CG80 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShfQ8CG80 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.93■□□□□ 0.78
ShfQ8CG80 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShfQ8CG80 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ShfQ8CG80 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ShfQ8CG80 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ShfQ8CG80 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.92■□□□□ 0.78
ShfQ8CG80 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.92■□□□□ 0.78
ShfQ8CG80 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ShfQ8CG80 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ShfQ8CG80 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms