Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Alx1Q8C8B0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.69■■□□□ 1.86
Alx1Q8C8B0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Alx1Q8C8B0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.68■■□□□ 1.86
Alx1Q8C8B0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Alx1Q8C8B0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.67■■□□□ 1.86
Alx1Q8C8B0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Alx1Q8C8B0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Alx1Q8C8B0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Alx1Q8C8B0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.66■■□□□ 1.86
Alx1Q8C8B0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Alx1Q8C8B0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Alx1Q8C8B0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Alx1Q8C8B0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Alx1Q8C8B0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Alx1Q8C8B0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Alx1Q8C8B0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.64■■□□□ 1.86
Alx1Q8C8B0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Alx1Q8C8B0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Alx1Q8C8B0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Alx1Q8C8B0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Alx1Q8C8B0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Alx1Q8C8B0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Alx1Q8C8B0 Gm44428-201ENSMUST00000204474 874 ntBASIC26.61■■□□□ 1.85
Alx1Q8C8B0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Alx1Q8C8B0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Alx1Q8C8B0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Alx1Q8C8B0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.59■■□□□ 1.85
Alx1Q8C8B0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Alx1Q8C8B0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Alx1Q8C8B0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Alx1Q8C8B0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.58■■□□□ 1.85
Alx1Q8C8B0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Alx1Q8C8B0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
Alx1Q8C8B0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Alx1Q8C8B0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Alx1Q8C8B0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.57■■□□□ 1.84
Alx1Q8C8B0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Alx1Q8C8B0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Alx1Q8C8B0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.56■■□□□ 1.84
Alx1Q8C8B0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Alx1Q8C8B0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Gm12366-201ENSMUST00000121722 873 ntBASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Gm5786-201ENSMUST00000085368 882 ntBASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Alx1Q8C8B0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Alx1Q8C8B0 Gm27502-201ENSMUST00000183495 199 ntBASIC26.54■■□□□ 1.84
Alx1Q8C8B0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.54■■□□□ 1.84
Alx1Q8C8B0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Alx1Q8C8B0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Alx1Q8C8B0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Alx1Q8C8B0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Alx1Q8C8B0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Alx1Q8C8B0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Alx1Q8C8B0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Alx1Q8C8B0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Alx1Q8C8B0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Alx1Q8C8B0 Cap2-205ENSMUST00000225824 1634 ntBASIC26.52■■□□□ 1.84
Alx1Q8C8B0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Alx1Q8C8B0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.52■■□□□ 1.84
Alx1Q8C8B0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.51■■□□□ 1.83
Alx1Q8C8B0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.51■■□□□ 1.83
Alx1Q8C8B0 Gm14523-201ENSMUST00000117260 558 ntBASIC26.51■■□□□ 1.83
Alx1Q8C8B0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.51■■□□□ 1.83
Alx1Q8C8B0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Alx1Q8C8B0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Alx1Q8C8B0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Alx1Q8C8B0 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.5■■□□□ 1.83
Alx1Q8C8B0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.5■■□□□ 1.83
Alx1Q8C8B0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.5■■□□□ 1.83
Alx1Q8C8B0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.5■■□□□ 1.83
Alx1Q8C8B0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.5■■□□□ 1.83
Alx1Q8C8B0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Alx1Q8C8B0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Alx1Q8C8B0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Alx1Q8C8B0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Alx1Q8C8B0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Alx1Q8C8B0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Alx1Q8C8B0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Alx1Q8C8B0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Alx1Q8C8B0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Alx1Q8C8B0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Alx1Q8C8B0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Alx1Q8C8B0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Alx1Q8C8B0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Alx1Q8C8B0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Alx1Q8C8B0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Alx1Q8C8B0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Alx1Q8C8B0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Alx1Q8C8B0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Alx1Q8C8B0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Alx1Q8C8B0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.45■■□□□ 1.83
Alx1Q8C8B0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Alx1Q8C8B0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Alx1Q8C8B0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.45■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms