Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.11■□□□□ 0.97
Ska3Q8C263 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ska3Q8C263 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ska3Q8C263 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ska3Q8C263 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ska3Q8C263 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ska3Q8C263 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ska3Q8C263 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ska3Q8C263 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ska3Q8C263 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ska3Q8C263 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ska3Q8C263 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ska3Q8C263 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.09■□□□□ 0.97
Ska3Q8C263 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ska3Q8C263 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.09■□□□□ 0.97
Ska3Q8C263 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.09■□□□□ 0.97
Ska3Q8C263 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ska3Q8C263 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ska3Q8C263 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ska3Q8C263 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ska3Q8C263 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ska3Q8C263 Gm11687-201ENSMUST00000118911 886 ntBASIC21.07■□□□□ 0.96
Ska3Q8C263 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ska3Q8C263 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ska3Q8C263 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ska3Q8C263 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.07■□□□□ 0.96
Ska3Q8C263 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.06■□□□□ 0.96
Ska3Q8C263 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ska3Q8C263 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ska3Q8C263 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ska3Q8C263 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ska3Q8C263 Gm16437-201ENSMUST00000025669 507 ntBASIC21.05■□□□□ 0.96
Ska3Q8C263 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ska3Q8C263 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ska3Q8C263 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ska3Q8C263 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.04■□□□□ 0.96
Ska3Q8C263 Gm11175-201ENSMUST00000116172 543 ntBASIC21.04■□□□□ 0.96
Ska3Q8C263 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ska3Q8C263 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.04■□□□□ 0.96
Ska3Q8C263 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ska3Q8C263 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.04■□□□□ 0.96
Ska3Q8C263 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ska3Q8C263 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ska3Q8C263 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ska3Q8C263 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ska3Q8C263 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ska3Q8C263 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ska3Q8C263 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ska3Q8C263 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ska3Q8C263 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ska3Q8C263 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ska3Q8C263 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ska3Q8C263 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ska3Q8C263 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Ska3Q8C263 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ska3Q8C263 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
Ska3Q8C263 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ska3Q8C263 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ska3Q8C263 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.01■□□□□ 0.95
Ska3Q8C263 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ska3Q8C263 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ska3Q8C263 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ska3Q8C263 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ska3Q8C263 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ska3Q8C263 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Ska3Q8C263 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ska3Q8C263 Mir6538-201ENSMUST00000183713 110 ntBASIC20.99■□□□□ 0.95
Ska3Q8C263 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ska3Q8C263 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.99■□□□□ 0.95
Ska3Q8C263 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ska3Q8C263 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.98■□□□□ 0.95
Ska3Q8C263 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ska3Q8C263 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Ska3Q8C263 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.98■□□□□ 0.95
Ska3Q8C263 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ska3Q8C263 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ska3Q8C263 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ska3Q8C263 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ska3Q8C263 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ska3Q8C263 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ska3Q8C263 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.96■□□□□ 0.95
Ska3Q8C263 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ska3Q8C263 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.95■□□□□ 0.94
Ska3Q8C263 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ska3Q8C263 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ska3Q8C263 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ska3Q8C263 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ska3Q8C263 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ska3Q8C263 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ska3Q8C263 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.93■□□□□ 0.94
Ska3Q8C263 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ska3Q8C263 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.93■□□□□ 0.94
Ska3Q8C263 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ska3Q8C263 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ska3Q8C263 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ska3Q8C263 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ska3Q8C263 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.92■□□□□ 0.94
Ska3Q8C263 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ska3Q8C263 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ska3Q8C263 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms