Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.98■□□□□ 0.95
Cpne1Q8C166 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne1Q8C166 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne1Q8C166 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne1Q8C166 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne1Q8C166 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Cpne1Q8C166 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne1Q8C166 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne1Q8C166 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne1Q8C166 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne1Q8C166 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.97■□□□□ 0.95
Cpne1Q8C166 Scarna2-201ENSMUST00000157560 414 ntBASIC20.97■□□□□ 0.95
Cpne1Q8C166 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne1Q8C166 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne1Q8C166 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne1Q8C166 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne1Q8C166 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.96■□□□□ 0.95
Cpne1Q8C166 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne1Q8C166 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne1Q8C166 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cpne1Q8C166 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne1Q8C166 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Cpne1Q8C166 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne1Q8C166 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne1Q8C166 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne1Q8C166 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne1Q8C166 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cpne1Q8C166 Terc-201ENSMUST00000082862 423 ntBASIC20.94■□□□□ 0.94
Cpne1Q8C166 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne1Q8C166 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne1Q8C166 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne1Q8C166 Gm9806-201ENSMUST00000051080 552 ntBASIC20.93■□□□□ 0.94
Cpne1Q8C166 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne1Q8C166 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.92■□□□□ 0.94
Cpne1Q8C166 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne1Q8C166 Gm11175-201ENSMUST00000116172 543 ntBASIC20.92■□□□□ 0.94
Cpne1Q8C166 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne1Q8C166 Gm16437-201ENSMUST00000025669 507 ntBASIC20.92■□□□□ 0.94
Cpne1Q8C166 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cpne1Q8C166 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne1Q8C166 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.92■□□□□ 0.94
Cpne1Q8C166 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne1Q8C166 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne1Q8C166 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne1Q8C166 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.91■□□□□ 0.94
Cpne1Q8C166 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Cpne1Q8C166 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne1Q8C166 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne1Q8C166 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne1Q8C166 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne1Q8C166 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne1Q8C166 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne1Q8C166 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne1Q8C166 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cpne1Q8C166 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne1Q8C166 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne1Q8C166 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne1Q8C166 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne1Q8C166 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne1Q8C166 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpne1Q8C166 Gm11687-201ENSMUST00000118911 886 ntBASIC20.86■□□□□ 0.93
Cpne1Q8C166 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.86■□□□□ 0.93
Cpne1Q8C166 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpne1Q8C166 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpne1Q8C166 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cpne1Q8C166 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cpne1Q8C166 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne1Q8C166 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cpne1Q8C166 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cpne1Q8C166 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.84■□□□□ 0.93
Cpne1Q8C166 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cpne1Q8C166 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Cpne1Q8C166 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cpne1Q8C166 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.83■□□□□ 0.93
Cpne1Q8C166 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cpne1Q8C166 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne1Q8C166 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne1Q8C166 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cpne1Q8C166 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne1Q8C166 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne1Q8C166 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpne1Q8C166 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne1Q8C166 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.81■□□□□ 0.92
Cpne1Q8C166 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne1Q8C166 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne1Q8C166 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cpne1Q8C166 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.81■□□□□ 0.92
Cpne1Q8C166 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne1Q8C166 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Cpne1Q8C166 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne1Q8C166 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne1Q8C166 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cpne1Q8C166 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne1Q8C166 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne1Q8C166 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne1Q8C166 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne1Q8C166 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne1Q8C166 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cpne1Q8C166 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne1Q8C166 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms