Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trub1Q8C0D0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trub1Q8C0D0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.29■■□□□ 1.32
Trub1Q8C0D0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.28■■□□□ 1.32
Trub1Q8C0D0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trub1Q8C0D0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trub1Q8C0D0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.27■■□□□ 1.32
Trub1Q8C0D0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trub1Q8C0D0 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.27■■□□□ 1.32
Trub1Q8C0D0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trub1Q8C0D0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trub1Q8C0D0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trub1Q8C0D0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trub1Q8C0D0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trub1Q8C0D0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Trub1Q8C0D0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.25■■□□□ 1.31
Trub1Q8C0D0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trub1Q8C0D0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trub1Q8C0D0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trub1Q8C0D0 Terc-201ENSMUST00000082862 423 ntBASIC23.25■■□□□ 1.31
Trub1Q8C0D0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trub1Q8C0D0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trub1Q8C0D0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trub1Q8C0D0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.24■■□□□ 1.31
Trub1Q8C0D0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trub1Q8C0D0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trub1Q8C0D0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.23■■□□□ 1.31
Trub1Q8C0D0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trub1Q8C0D0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trub1Q8C0D0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trub1Q8C0D0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Trub1Q8C0D0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Trub1Q8C0D0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.21■■□□□ 1.31
Trub1Q8C0D0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trub1Q8C0D0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trub1Q8C0D0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trub1Q8C0D0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trub1Q8C0D0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trub1Q8C0D0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trub1Q8C0D0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trub1Q8C0D0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trub1Q8C0D0 Gm6311-201ENSMUST00000073790 878 ntBASIC23.19■■□□□ 1.3
Trub1Q8C0D0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trub1Q8C0D0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trub1Q8C0D0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.19■■□□□ 1.3
Trub1Q8C0D0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
Trub1Q8C0D0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trub1Q8C0D0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.18■■□□□ 1.3
Trub1Q8C0D0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trub1Q8C0D0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
Trub1Q8C0D0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trub1Q8C0D0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trub1Q8C0D0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Trub1Q8C0D0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trub1Q8C0D0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.16■■□□□ 1.3
Trub1Q8C0D0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Trub1Q8C0D0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trub1Q8C0D0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trub1Q8C0D0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trub1Q8C0D0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trub1Q8C0D0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trub1Q8C0D0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trub1Q8C0D0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.15■■□□□ 1.3
Trub1Q8C0D0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trub1Q8C0D0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trub1Q8C0D0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trub1Q8C0D0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trub1Q8C0D0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.13■■□□□ 1.29
Trub1Q8C0D0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trub1Q8C0D0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Trub1Q8C0D0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trub1Q8C0D0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.13■■□□□ 1.29
Trub1Q8C0D0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.13■■□□□ 1.29
Trub1Q8C0D0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trub1Q8C0D0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Trub1Q8C0D0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trub1Q8C0D0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trub1Q8C0D0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trub1Q8C0D0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trub1Q8C0D0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trub1Q8C0D0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trub1Q8C0D0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trub1Q8C0D0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trub1Q8C0D0 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.11■■□□□ 1.29
Trub1Q8C0D0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trub1Q8C0D0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trub1Q8C0D0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Trub1Q8C0D0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trub1Q8C0D0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Trub1Q8C0D0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.1■■□□□ 1.29
Trub1Q8C0D0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trub1Q8C0D0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms