Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.84■□□□□ 0.77
Ube3dQ8BX13 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3dQ8BX13 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3dQ8BX13 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3dQ8BX13 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3dQ8BX13 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3dQ8BX13 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.83■□□□□ 0.77
Ube3dQ8BX13 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3dQ8BX13 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3dQ8BX13 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3dQ8BX13 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3dQ8BX13 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Ube3dQ8BX13 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3dQ8BX13 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3dQ8BX13 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3dQ8BX13 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3dQ8BX13 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.82■□□□□ 0.76
Ube3dQ8BX13 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3dQ8BX13 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3dQ8BX13 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3dQ8BX13 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3dQ8BX13 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3dQ8BX13 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ube3dQ8BX13 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3dQ8BX13 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ube3dQ8BX13 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3dQ8BX13 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ube3dQ8BX13 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3dQ8BX13 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3dQ8BX13 Gm9806-201ENSMUST00000051080 552 ntBASIC19.8■□□□□ 0.76
Ube3dQ8BX13 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3dQ8BX13 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3dQ8BX13 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3dQ8BX13 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.79■□□□□ 0.76
Ube3dQ8BX13 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3dQ8BX13 Gm11687-201ENSMUST00000118911 886 ntBASIC19.79■□□□□ 0.76
Ube3dQ8BX13 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3dQ8BX13 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3dQ8BX13 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.79■□□□□ 0.76
Ube3dQ8BX13 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3dQ8BX13 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube3dQ8BX13 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3dQ8BX13 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3dQ8BX13 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ube3dQ8BX13 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ube3dQ8BX13 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.78■□□□□ 0.76
Ube3dQ8BX13 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ube3dQ8BX13 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3dQ8BX13 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube3dQ8BX13 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3dQ8BX13 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube3dQ8BX13 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.76■□□□□ 0.75
Ube3dQ8BX13 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Gm16437-201ENSMUST00000025669 507 ntBASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Cap2-205ENSMUST00000225824 1634 ntBASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube3dQ8BX13 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ube3dQ8BX13 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3dQ8BX13 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3dQ8BX13 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3dQ8BX13 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube3dQ8BX13 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3dQ8BX13 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.74■□□□□ 0.75
Ube3dQ8BX13 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3dQ8BX13 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3dQ8BX13 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube3dQ8BX13 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ube3dQ8BX13 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.74■□□□□ 0.75
Ube3dQ8BX13 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3dQ8BX13 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3dQ8BX13 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3dQ8BX13 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3dQ8BX13 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ube3dQ8BX13 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.73■□□□□ 0.75
Ube3dQ8BX13 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ube3dQ8BX13 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ube3dQ8BX13 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.71■□□□□ 0.75
Ube3dQ8BX13 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube3dQ8BX13 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3dQ8BX13 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3dQ8BX13 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3dQ8BX13 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ube3dQ8BX13 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms