Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnih3Q6ZWS4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cnih3Q6ZWS4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cnih3Q6ZWS4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cnih3Q6ZWS4 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.74■□□□□ 0.91
Cnih3Q6ZWS4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cnih3Q6ZWS4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cnih3Q6ZWS4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.74■□□□□ 0.91
Cnih3Q6ZWS4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cnih3Q6ZWS4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnih3Q6ZWS4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnih3Q6ZWS4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cnih3Q6ZWS4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnih3Q6ZWS4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnih3Q6ZWS4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cnih3Q6ZWS4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnih3Q6ZWS4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cnih3Q6ZWS4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnih3Q6ZWS4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.72■□□□□ 0.91
Cnih3Q6ZWS4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.72■□□□□ 0.91
Cnih3Q6ZWS4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cnih3Q6ZWS4 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.72■□□□□ 0.91
Cnih3Q6ZWS4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnih3Q6ZWS4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnih3Q6ZWS4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cnih3Q6ZWS4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cnih3Q6ZWS4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.71■□□□□ 0.91
Cnih3Q6ZWS4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cnih3Q6ZWS4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cnih3Q6ZWS4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cnih3Q6ZWS4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnih3Q6ZWS4 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.7■□□□□ 0.9
Cnih3Q6ZWS4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnih3Q6ZWS4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cnih3Q6ZWS4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cnih3Q6ZWS4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnih3Q6ZWS4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.69■□□□□ 0.9
Cnih3Q6ZWS4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cnih3Q6ZWS4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnih3Q6ZWS4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnih3Q6ZWS4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.69■□□□□ 0.9
Cnih3Q6ZWS4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnih3Q6ZWS4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnih3Q6ZWS4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnih3Q6ZWS4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cnih3Q6ZWS4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.68■□□□□ 0.9
Cnih3Q6ZWS4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih3Q6ZWS4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.67■□□□□ 0.9
Cnih3Q6ZWS4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih3Q6ZWS4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih3Q6ZWS4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnih3Q6ZWS4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnih3Q6ZWS4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cnih3Q6ZWS4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnih3Q6ZWS4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cnih3Q6ZWS4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih3Q6ZWS4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cnih3Q6ZWS4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Cnih3Q6ZWS4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih3Q6ZWS4 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.65■□□□□ 0.9
Cnih3Q6ZWS4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Cnih3Q6ZWS4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih3Q6ZWS4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cnih3Q6ZWS4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cnih3Q6ZWS4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cnih3Q6ZWS4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnih3Q6ZWS4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnih3Q6ZWS4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cnih3Q6ZWS4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnih3Q6ZWS4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnih3Q6ZWS4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cnih3Q6ZWS4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnih3Q6ZWS4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnih3Q6ZWS4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnih3Q6ZWS4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnih3Q6ZWS4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cnih3Q6ZWS4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.61■□□□□ 0.89
Cnih3Q6ZWS4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnih3Q6ZWS4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih3Q6ZWS4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih3Q6ZWS4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih3Q6ZWS4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.6■□□□□ 0.89
Cnih3Q6ZWS4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih3Q6ZWS4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih3Q6ZWS4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.59■□□□□ 0.89
Cnih3Q6ZWS4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih3Q6ZWS4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih3Q6ZWS4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih3Q6ZWS4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih3Q6ZWS4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih3Q6ZWS4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnih3Q6ZWS4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnih3Q6ZWS4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnih3Q6ZWS4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cnih3Q6ZWS4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnih3Q6ZWS4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cnih3Q6ZWS4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnih3Q6ZWS4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cnih3Q6ZWS4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cnih3Q6ZWS4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms