Protein–RNA interactions for Protein: Q6PB51

Ccdc117, Coiled-coil domain-containing protein 117, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc117Q6PB51 Mir3960-201ENSMUST00000198213 73 ntBASIC23.4■■□□□ 1.34
Ccdc117Q6PB51 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Ccdc117Q6PB51 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.39■■□□□ 1.33
Ccdc117Q6PB51 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc117Q6PB51 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc117Q6PB51 Gm9812-201ENSMUST00000061934 968 ntBASIC23.38■■□□□ 1.33
Ccdc117Q6PB51 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc117Q6PB51 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Ccdc117Q6PB51 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.37■■□□□ 1.33
Ccdc117Q6PB51 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc117Q6PB51 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc117Q6PB51 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.35■■□□□ 1.33
Ccdc117Q6PB51 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.35■■□□□ 1.33
Ccdc117Q6PB51 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc117Q6PB51 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Ccdc117Q6PB51 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc117Q6PB51 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc117Q6PB51 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc117Q6PB51 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.34■■□□□ 1.33
Ccdc117Q6PB51 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.34■■□□□ 1.33
Ccdc117Q6PB51 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc117Q6PB51 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.33■■□□□ 1.33
Ccdc117Q6PB51 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc117Q6PB51 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc117Q6PB51 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc117Q6PB51 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc117Q6PB51 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ccdc117Q6PB51 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.33■■□□□ 1.32
Ccdc117Q6PB51 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc117Q6PB51 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Ccdc117Q6PB51 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.32■■□□□ 1.32
Ccdc117Q6PB51 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc117Q6PB51 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc117Q6PB51 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc117Q6PB51 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc117Q6PB51 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc117Q6PB51 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.3■■□□□ 1.32
Ccdc117Q6PB51 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.3■■□□□ 1.32
Ccdc117Q6PB51 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc117Q6PB51 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc117Q6PB51 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.3■■□□□ 1.32
Ccdc117Q6PB51 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc117Q6PB51 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc117Q6PB51 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc117Q6PB51 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.28■■□□□ 1.32
Ccdc117Q6PB51 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Ccdc117Q6PB51 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.28■■□□□ 1.32
Ccdc117Q6PB51 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ccdc117Q6PB51 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ccdc117Q6PB51 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc117Q6PB51 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.27■■□□□ 1.32
Ccdc117Q6PB51 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc117Q6PB51 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.26■■□□□ 1.31
Ccdc117Q6PB51 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc117Q6PB51 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.26■■□□□ 1.31
Ccdc117Q6PB51 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc117Q6PB51 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc117Q6PB51 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc117Q6PB51 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ccdc117Q6PB51 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Ccdc117Q6PB51 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc117Q6PB51 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.24■■□□□ 1.31
Ccdc117Q6PB51 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ccdc117Q6PB51 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ccdc117Q6PB51 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.23■■□□□ 1.31
Ccdc117Q6PB51 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc117Q6PB51 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Ccdc117Q6PB51 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ccdc117Q6PB51 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ccdc117Q6PB51 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc117Q6PB51 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.2■■□□□ 1.3
Ccdc117Q6PB51 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc117Q6PB51 Terc-201ENSMUST00000082862 423 ntBASIC23.19■■□□□ 1.3
Ccdc117Q6PB51 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc117Q6PB51 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc117Q6PB51 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.18■■□□□ 1.3
Ccdc117Q6PB51 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc117Q6PB51 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Ccdc117Q6PB51 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc117Q6PB51 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc117Q6PB51 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc117Q6PB51 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc117Q6PB51 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc117Q6PB51 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc117Q6PB51 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.16■■□□□ 1.3
Ccdc117Q6PB51 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc117Q6PB51 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc117Q6PB51 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.16■■□□□ 1.3
Ccdc117Q6PB51 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ccdc117Q6PB51 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc117Q6PB51 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc117Q6PB51 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms