Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Snx6Q6P8X1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snx6Q6P8X1 Gm9812-201ENSMUST00000061934 968 ntBASIC21.36■■□□□ 1.01
Snx6Q6P8X1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Snx6Q6P8X1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snx6Q6P8X1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Snx6Q6P8X1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.35■■□□□ 1.01
Snx6Q6P8X1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Snx6Q6P8X1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snx6Q6P8X1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snx6Q6P8X1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snx6Q6P8X1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Snx6Q6P8X1 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.33■■□□□ 1.01
Snx6Q6P8X1 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.33■■□□□ 1.01
Snx6Q6P8X1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snx6Q6P8X1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Snx6Q6P8X1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.32■■□□□ 1
Snx6Q6P8X1 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.32■■□□□ 1
Snx6Q6P8X1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.32■■□□□ 1
Snx6Q6P8X1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.32■■□□□ 1
Snx6Q6P8X1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Snx6Q6P8X1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Snx6Q6P8X1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snx6Q6P8X1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.32■■□□□ 1
Snx6Q6P8X1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.31■■□□□ 1
Snx6Q6P8X1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.31■■□□□ 1
Snx6Q6P8X1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Snx6Q6P8X1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snx6Q6P8X1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.31■■□□□ 1
Snx6Q6P8X1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snx6Q6P8X1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Snx6Q6P8X1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snx6Q6P8X1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Snx6Q6P8X1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Snx6Q6P8X1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Snx6Q6P8X1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snx6Q6P8X1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Snx6Q6P8X1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snx6Q6P8X1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Snx6Q6P8X1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snx6Q6P8X1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snx6Q6P8X1 Gm45364-201ENSMUST00000210883 159 ntBASIC21.28■■□□□ 1
Snx6Q6P8X1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.28■■□□□ 1
Snx6Q6P8X1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.28■■□□□ 1
Snx6Q6P8X1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snx6Q6P8X1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snx6Q6P8X1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Snx6Q6P8X1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snx6Q6P8X1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snx6Q6P8X1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.27■■□□□ 1
Snx6Q6P8X1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Snx6Q6P8X1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Snx6Q6P8X1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Snx6Q6P8X1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Snx6Q6P8X1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.27■□□□□ 0.99
Snx6Q6P8X1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Snx6Q6P8X1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.26■□□□□ 0.99
Snx6Q6P8X1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.26■□□□□ 0.99
Snx6Q6P8X1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx6Q6P8X1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx6Q6P8X1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx6Q6P8X1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx6Q6P8X1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx6Q6P8X1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Snx6Q6P8X1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Snx6Q6P8X1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snx6Q6P8X1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snx6Q6P8X1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Snx6Q6P8X1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snx6Q6P8X1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.23■□□□□ 0.99
Snx6Q6P8X1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snx6Q6P8X1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snx6Q6P8X1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snx6Q6P8X1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snx6Q6P8X1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.22■□□□□ 0.99
Snx6Q6P8X1 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.22■□□□□ 0.99
Snx6Q6P8X1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snx6Q6P8X1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snx6Q6P8X1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snx6Q6P8X1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snx6Q6P8X1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snx6Q6P8X1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snx6Q6P8X1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snx6Q6P8X1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snx6Q6P8X1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snx6Q6P8X1 Terc-201ENSMUST00000082862 423 ntBASIC21.2■□□□□ 0.98
Snx6Q6P8X1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snx6Q6P8X1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snx6Q6P8X1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snx6Q6P8X1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx6Q6P8X1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.19■□□□□ 0.98
Snx6Q6P8X1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms