Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ParpbpQ6IRT3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ParpbpQ6IRT3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.96■□□□□ 0.95
ParpbpQ6IRT3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ParpbpQ6IRT3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ParpbpQ6IRT3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ParpbpQ6IRT3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ParpbpQ6IRT3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ParpbpQ6IRT3 Gm9812-201ENSMUST00000061934 968 ntBASIC20.94■□□□□ 0.94
ParpbpQ6IRT3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ParpbpQ6IRT3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ParpbpQ6IRT3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ParpbpQ6IRT3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ParpbpQ6IRT3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ParpbpQ6IRT3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ParpbpQ6IRT3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ParpbpQ6IRT3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ParpbpQ6IRT3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ParpbpQ6IRT3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ParpbpQ6IRT3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ParpbpQ6IRT3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.91■□□□□ 0.94
ParpbpQ6IRT3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ParpbpQ6IRT3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ParpbpQ6IRT3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ParpbpQ6IRT3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ParpbpQ6IRT3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.9■□□□□ 0.94
ParpbpQ6IRT3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ParpbpQ6IRT3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ParpbpQ6IRT3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ParpbpQ6IRT3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ParpbpQ6IRT3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ParpbpQ6IRT3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ParpbpQ6IRT3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ParpbpQ6IRT3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ParpbpQ6IRT3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ParpbpQ6IRT3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ParpbpQ6IRT3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ParpbpQ6IRT3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ParpbpQ6IRT3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ParpbpQ6IRT3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ParpbpQ6IRT3 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.88■□□□□ 0.93
ParpbpQ6IRT3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ParpbpQ6IRT3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.87■□□□□ 0.93
ParpbpQ6IRT3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ParpbpQ6IRT3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.87■□□□□ 0.93
ParpbpQ6IRT3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ParpbpQ6IRT3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
ParpbpQ6IRT3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ParpbpQ6IRT3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ParpbpQ6IRT3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ParpbpQ6IRT3 Scarna2-201ENSMUST00000157560 414 ntBASIC20.86■□□□□ 0.93
ParpbpQ6IRT3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ParpbpQ6IRT3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ParpbpQ6IRT3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ParpbpQ6IRT3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ParpbpQ6IRT3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ParpbpQ6IRT3 Terc-201ENSMUST00000082862 423 ntBASIC20.85■□□□□ 0.93
ParpbpQ6IRT3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ParpbpQ6IRT3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ParpbpQ6IRT3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.84■□□□□ 0.93
ParpbpQ6IRT3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ParpbpQ6IRT3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ParpbpQ6IRT3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ParpbpQ6IRT3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ParpbpQ6IRT3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ParpbpQ6IRT3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ParpbpQ6IRT3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ParpbpQ6IRT3 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.82■□□□□ 0.92
ParpbpQ6IRT3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.82■□□□□ 0.92
ParpbpQ6IRT3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ParpbpQ6IRT3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ParpbpQ6IRT3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ParpbpQ6IRT3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ParpbpQ6IRT3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ParpbpQ6IRT3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ParpbpQ6IRT3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
ParpbpQ6IRT3 Gm16437-201ENSMUST00000025669 507 ntBASIC20.81■□□□□ 0.92
ParpbpQ6IRT3 Gm9806-201ENSMUST00000051080 552 ntBASIC20.81■□□□□ 0.92
ParpbpQ6IRT3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ParpbpQ6IRT3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ParpbpQ6IRT3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ParpbpQ6IRT3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ParpbpQ6IRT3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ParpbpQ6IRT3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ParpbpQ6IRT3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.79■□□□□ 0.92
ParpbpQ6IRT3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ParpbpQ6IRT3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ParpbpQ6IRT3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.78■□□□□ 0.92
ParpbpQ6IRT3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ParpbpQ6IRT3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ParpbpQ6IRT3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ParpbpQ6IRT3 Gm11687-201ENSMUST00000118911 886 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms