Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.69■■□□□ 1.38
Scube3Q66PY1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.69■■□□□ 1.38
Scube3Q66PY1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scube3Q66PY1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scube3Q66PY1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scube3Q66PY1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.68■■□□□ 1.38
Scube3Q66PY1 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.68■■□□□ 1.38
Scube3Q66PY1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scube3Q66PY1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Scube3Q66PY1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scube3Q66PY1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scube3Q66PY1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scube3Q66PY1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scube3Q66PY1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scube3Q66PY1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scube3Q66PY1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scube3Q66PY1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.66■■□□□ 1.38
Scube3Q66PY1 Gm27502-201ENSMUST00000183495 199 ntBASIC23.66■■□□□ 1.38
Scube3Q66PY1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.66■■□□□ 1.38
Scube3Q66PY1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scube3Q66PY1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Scube3Q66PY1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.64■■□□□ 1.38
Scube3Q66PY1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scube3Q66PY1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Scube3Q66PY1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Scube3Q66PY1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scube3Q66PY1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Scube3Q66PY1 Cap2-205ENSMUST00000225824 1634 ntBASIC23.62■■□□□ 1.37
Scube3Q66PY1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Scube3Q66PY1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scube3Q66PY1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scube3Q66PY1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scube3Q66PY1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scube3Q66PY1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Scube3Q66PY1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.61■■□□□ 1.37
Scube3Q66PY1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.61■■□□□ 1.37
Scube3Q66PY1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scube3Q66PY1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Scube3Q66PY1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scube3Q66PY1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.6■■□□□ 1.37
Scube3Q66PY1 Gm12366-201ENSMUST00000121722 873 ntBASIC23.6■■□□□ 1.37
Scube3Q66PY1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.6■■□□□ 1.37
Scube3Q66PY1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.6■■□□□ 1.37
Scube3Q66PY1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.6■■□□□ 1.37
Scube3Q66PY1 Gm5786-201ENSMUST00000085368 882 ntBASIC23.6■■□□□ 1.37
Scube3Q66PY1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scube3Q66PY1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scube3Q66PY1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scube3Q66PY1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Scube3Q66PY1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scube3Q66PY1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scube3Q66PY1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scube3Q66PY1 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.58■■□□□ 1.37
Scube3Q66PY1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scube3Q66PY1 Gm44428-201ENSMUST00000204474 874 ntBASIC23.58■■□□□ 1.37
Scube3Q66PY1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scube3Q66PY1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Scube3Q66PY1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scube3Q66PY1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scube3Q66PY1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scube3Q66PY1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scube3Q66PY1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scube3Q66PY1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.57■■□□□ 1.36
Scube3Q66PY1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Scube3Q66PY1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Scube3Q66PY1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Scube3Q66PY1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.55■■□□□ 1.36
Scube3Q66PY1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Scube3Q66PY1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scube3Q66PY1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scube3Q66PY1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.54■■□□□ 1.36
Scube3Q66PY1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scube3Q66PY1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Scube3Q66PY1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scube3Q66PY1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.53■■□□□ 1.36
Scube3Q66PY1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Scube3Q66PY1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Scube3Q66PY1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.53■■□□□ 1.36
Scube3Q66PY1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Scube3Q66PY1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Scube3Q66PY1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.53■■□□□ 1.36
Scube3Q66PY1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scube3Q66PY1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Scube3Q66PY1 Gm14523-201ENSMUST00000117260 558 ntBASIC23.52■■□□□ 1.36
Scube3Q66PY1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.52■■□□□ 1.36
Scube3Q66PY1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scube3Q66PY1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Scube3Q66PY1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.51■■□□□ 1.35
Scube3Q66PY1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.51■■□□□ 1.35
Scube3Q66PY1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Scube3Q66PY1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms