Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptp4a1Q63739 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.23■□□□□ 0.83
Ptp4a1Q63739 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptp4a1Q63739 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptp4a1Q63739 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptp4a1Q63739 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.22■□□□□ 0.83
Ptp4a1Q63739 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptp4a1Q63739 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Ptp4a1Q63739 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ptp4a1Q63739 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptp4a1Q63739 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ptp4a1Q63739 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.21■□□□□ 0.83
Ptp4a1Q63739 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptp4a1Q63739 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptp4a1Q63739 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ptp4a1Q63739 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptp4a1Q63739 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptp4a1Q63739 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptp4a1Q63739 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ptp4a1Q63739 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptp4a1Q63739 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptp4a1Q63739 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptp4a1Q63739 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptp4a1Q63739 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ptp4a1Q63739 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.19■□□□□ 0.82
Ptp4a1Q63739 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptp4a1Q63739 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptp4a1Q63739 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptp4a1Q63739 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptp4a1Q63739 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptp4a1Q63739 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptp4a1Q63739 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptp4a1Q63739 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ptp4a1Q63739 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptp4a1Q63739 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptp4a1Q63739 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptp4a1Q63739 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptp4a1Q63739 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptp4a1Q63739 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptp4a1Q63739 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptp4a1Q63739 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ptp4a1Q63739 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptp4a1Q63739 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ptp4a1Q63739 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ptp4a1Q63739 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ptp4a1Q63739 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ptp4a1Q63739 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptp4a1Q63739 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ptp4a1Q63739 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptp4a1Q63739 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptp4a1Q63739 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptp4a1Q63739 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ptp4a1Q63739 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptp4a1Q63739 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptp4a1Q63739 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptp4a1Q63739 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ptp4a1Q63739 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ptp4a1Q63739 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptp4a1Q63739 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ptp4a1Q63739 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.11■□□□□ 0.81
Ptp4a1Q63739 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptp4a1Q63739 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.1■□□□□ 0.81
Ptp4a1Q63739 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptp4a1Q63739 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ptp4a1Q63739 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptp4a1Q63739 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptp4a1Q63739 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptp4a1Q63739 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptp4a1Q63739 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ptp4a1Q63739 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptp4a1Q63739 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ptp4a1Q63739 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ptp4a1Q63739 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptp4a1Q63739 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ptp4a1Q63739 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ptp4a1Q63739 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptp4a1Q63739 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptp4a1Q63739 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptp4a1Q63739 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptp4a1Q63739 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptp4a1Q63739 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ptp4a1Q63739 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptp4a1Q63739 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms