Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SspnQ62147 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SspnQ62147 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SspnQ62147 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SspnQ62147 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
SspnQ62147 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SspnQ62147 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SspnQ62147 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SspnQ62147 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SspnQ62147 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SspnQ62147 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SspnQ62147 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SspnQ62147 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
SspnQ62147 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SspnQ62147 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SspnQ62147 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SspnQ62147 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SspnQ62147 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SspnQ62147 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SspnQ62147 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SspnQ62147 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.63■□□□□ 0.57
SspnQ62147 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.63■□□□□ 0.57
SspnQ62147 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SspnQ62147 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SspnQ62147 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SspnQ62147 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SspnQ62147 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SspnQ62147 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SspnQ62147 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SspnQ62147 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SspnQ62147 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SspnQ62147 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SspnQ62147 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SspnQ62147 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SspnQ62147 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SspnQ62147 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.6■□□□□ 0.57
SspnQ62147 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SspnQ62147 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SspnQ62147 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SspnQ62147 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SspnQ62147 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SspnQ62147 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SspnQ62147 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SspnQ62147 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SspnQ62147 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SspnQ62147 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SspnQ62147 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SspnQ62147 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SspnQ62147 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SspnQ62147 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SspnQ62147 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
SspnQ62147 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SspnQ62147 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.58■□□□□ 0.56
SspnQ62147 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SspnQ62147 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SspnQ62147 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.57■□□□□ 0.56
SspnQ62147 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SspnQ62147 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SspnQ62147 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SspnQ62147 Gm4799-201ENSMUST00000095396 657 ntBASIC18.57■□□□□ 0.56
SspnQ62147 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SspnQ62147 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SspnQ62147 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.56■□□□□ 0.56
SspnQ62147 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SspnQ62147 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SspnQ62147 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.56■□□□□ 0.56
SspnQ62147 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SspnQ62147 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SspnQ62147 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SspnQ62147 Gm7432-201ENSMUST00000210343 879 ntBASIC18.55■□□□□ 0.56
SspnQ62147 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SspnQ62147 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SspnQ62147 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SspnQ62147 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.54■□□□□ 0.56
SspnQ62147 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SspnQ62147 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.54■□□□□ 0.56
SspnQ62147 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SspnQ62147 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.54■□□□□ 0.56
SspnQ62147 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.54■□□□□ 0.56
SspnQ62147 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SspnQ62147 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SspnQ62147 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SspnQ62147 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SspnQ62147 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.53■□□□□ 0.56
SspnQ62147 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SspnQ62147 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SspnQ62147 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SspnQ62147 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SspnQ62147 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SspnQ62147 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.52■□□□□ 0.56
SspnQ62147 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SspnQ62147 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SspnQ62147 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SspnQ62147 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SspnQ62147 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SspnQ62147 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SspnQ62147 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SspnQ62147 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SspnQ62147 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SspnQ62147 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms