Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav7d-4Q5R1H9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav7d-4Q5R1H9 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.22■□□□□ 0.35
Trav7d-4Q5R1H9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Trav7d-4Q5R1H9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7d-4Q5R1H9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7d-4Q5R1H9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav7d-4Q5R1H9 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.21■□□□□ 0.35
Trav7d-4Q5R1H9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Trav7d-4Q5R1H9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7d-4Q5R1H9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7d-4Q5R1H9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7d-4Q5R1H9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav7d-4Q5R1H9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Trav7d-4Q5R1H9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7d-4Q5R1H9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7d-4Q5R1H9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7d-4Q5R1H9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav7d-4Q5R1H9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7d-4Q5R1H9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7d-4Q5R1H9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7d-4Q5R1H9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7d-4Q5R1H9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7d-4Q5R1H9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7d-4Q5R1H9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7d-4Q5R1H9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7d-4Q5R1H9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav7d-4Q5R1H9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7d-4Q5R1H9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav7d-4Q5R1H9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7d-4Q5R1H9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Trav7d-4Q5R1H9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7d-4Q5R1H9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7d-4Q5R1H9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7d-4Q5R1H9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav7d-4Q5R1H9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7d-4Q5R1H9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7d-4Q5R1H9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7d-4Q5R1H9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav7d-4Q5R1H9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.16■□□□□ 0.34
Trav7d-4Q5R1H9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav7d-4Q5R1H9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7d-4Q5R1H9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav7d-4Q5R1H9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7d-4Q5R1H9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7d-4Q5R1H9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7d-4Q5R1H9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7d-4Q5R1H9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7d-4Q5R1H9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7d-4Q5R1H9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7d-4Q5R1H9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7d-4Q5R1H9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav7d-4Q5R1H9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7d-4Q5R1H9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7d-4Q5R1H9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7d-4Q5R1H9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7d-4Q5R1H9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav7d-4Q5R1H9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7d-4Q5R1H9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav7d-4Q5R1H9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7d-4Q5R1H9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7d-4Q5R1H9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trav7d-4Q5R1H9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7d-4Q5R1H9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7d-4Q5R1H9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7d-4Q5R1H9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav7d-4Q5R1H9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav7d-4Q5R1H9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav7d-4Q5R1H9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7d-4Q5R1H9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7d-4Q5R1H9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7d-4Q5R1H9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7d-4Q5R1H9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7d-4Q5R1H9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7d-4Q5R1H9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7d-4Q5R1H9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7d-4Q5R1H9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7d-4Q5R1H9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7d-4Q5R1H9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav7d-4Q5R1H9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7d-4Q5R1H9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7d-4Q5R1H9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7d-4Q5R1H9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7d-4Q5R1H9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7d-4Q5R1H9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7d-4Q5R1H9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav7d-4Q5R1H9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav7d-4Q5R1H9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trav7d-4Q5R1H9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav7d-4Q5R1H9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7d-4Q5R1H9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trav7d-4Q5R1H9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms