Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Gm12253Q5NC48 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm12253Q5NC48 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm12253Q5NC48 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm12253Q5NC48 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm12253Q5NC48 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm12253Q5NC48 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm12253Q5NC48 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm12253Q5NC48 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.48■□□□□ 0.71
Gm12253Q5NC48 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm12253Q5NC48 Terc-201ENSMUST00000082862 423 ntBASIC19.47■□□□□ 0.71
Gm12253Q5NC48 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm12253Q5NC48 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm12253Q5NC48 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm12253Q5NC48 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm12253Q5NC48 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Gm12253Q5NC48 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm12253Q5NC48 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm12253Q5NC48 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm12253Q5NC48 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm12253Q5NC48 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm12253Q5NC48 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm12253Q5NC48 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm12253Q5NC48 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm12253Q5NC48 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.44■□□□□ 0.7
Gm12253Q5NC48 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm12253Q5NC48 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm12253Q5NC48 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm12253Q5NC48 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Gm12253Q5NC48 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm12253Q5NC48 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.42■□□□□ 0.7
Gm12253Q5NC48 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm12253Q5NC48 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm12253Q5NC48 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm12253Q5NC48 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.41■□□□□ 0.7
Gm12253Q5NC48 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm12253Q5NC48 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm12253Q5NC48 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm12253Q5NC48 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gm12253Q5NC48 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm12253Q5NC48 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm12253Q5NC48 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm12253Q5NC48 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm12253Q5NC48 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm12253Q5NC48 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.39■□□□□ 0.69
Gm12253Q5NC48 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm12253Q5NC48 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm12253Q5NC48 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm12253Q5NC48 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm12253Q5NC48 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm12253Q5NC48 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm12253Q5NC48 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm12253Q5NC48 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm12253Q5NC48 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm12253Q5NC48 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm12253Q5NC48 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm12253Q5NC48 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.37■□□□□ 0.69
Gm12253Q5NC48 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gm12253Q5NC48 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm12253Q5NC48 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.36■□□□□ 0.69
Gm12253Q5NC48 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm12253Q5NC48 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm12253Q5NC48 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm12253Q5NC48 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm12253Q5NC48 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Gm12253Q5NC48 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm12253Q5NC48 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm12253Q5NC48 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm12253Q5NC48 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.35■□□□□ 0.69
Gm12253Q5NC48 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm12253Q5NC48 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm12253Q5NC48 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm12253Q5NC48 Gm10420-201ENSMUST00000121713 882 ntBASIC19.33■□□□□ 0.68
Gm12253Q5NC48 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm12253Q5NC48 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12253Q5NC48 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12253Q5NC48 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12253Q5NC48 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12253Q5NC48 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12253Q5NC48 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12253Q5NC48 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12253Q5NC48 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12253Q5NC48 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12253Q5NC48 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm12253Q5NC48 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Gm12253Q5NC48 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12253Q5NC48 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm12253Q5NC48 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm12253Q5NC48 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm12253Q5NC48 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms