Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa6Q3UH99 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa6Q3UH99 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shisa6Q3UH99 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Shisa6Q3UH99 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shisa6Q3UH99 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa6Q3UH99 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Shisa6Q3UH99 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa6Q3UH99 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa6Q3UH99 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa6Q3UH99 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa6Q3UH99 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa6Q3UH99 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa6Q3UH99 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.61■□□□□ 0.89
Shisa6Q3UH99 Gm5921-201ENSMUST00000075898 882 ntBASIC20.61■□□□□ 0.89
Shisa6Q3UH99 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.61■□□□□ 0.89
Shisa6Q3UH99 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa6Q3UH99 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa6Q3UH99 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa6Q3UH99 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Shisa6Q3UH99 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa6Q3UH99 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa6Q3UH99 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa6Q3UH99 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa6Q3UH99 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa6Q3UH99 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa6Q3UH99 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa6Q3UH99 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Shisa6Q3UH99 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa6Q3UH99 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa6Q3UH99 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa6Q3UH99 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa6Q3UH99 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa6Q3UH99 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa6Q3UH99 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa6Q3UH99 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.57■□□□□ 0.88
Shisa6Q3UH99 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa6Q3UH99 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.56■□□□□ 0.88
Shisa6Q3UH99 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Shisa6Q3UH99 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa6Q3UH99 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.55■□□□□ 0.88
Shisa6Q3UH99 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa6Q3UH99 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.55■□□□□ 0.88
Shisa6Q3UH99 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa6Q3UH99 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.54■□□□□ 0.88
Shisa6Q3UH99 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa6Q3UH99 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.54■□□□□ 0.88
Shisa6Q3UH99 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa6Q3UH99 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.53■□□□□ 0.88
Shisa6Q3UH99 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Shisa6Q3UH99 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Shisa6Q3UH99 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa6Q3UH99 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Shisa6Q3UH99 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa6Q3UH99 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa6Q3UH99 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa6Q3UH99 Gm5812-201ENSMUST00000061073 957 ntBASIC20.5■□□□□ 0.87
Shisa6Q3UH99 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa6Q3UH99 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa6Q3UH99 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa6Q3UH99 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa6Q3UH99 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa6Q3UH99 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa6Q3UH99 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa6Q3UH99 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Shisa6Q3UH99 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa6Q3UH99 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa6Q3UH99 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa6Q3UH99 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa6Q3UH99 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa6Q3UH99 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.48■□□□□ 0.87
Shisa6Q3UH99 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.48■□□□□ 0.87
Shisa6Q3UH99 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa6Q3UH99 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Shisa6Q3UH99 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Shisa6Q3UH99 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa6Q3UH99 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Shisa6Q3UH99 Gm13238-201ENSMUST00000117655 780 ntBASIC20.45■□□□□ 0.86
Shisa6Q3UH99 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Shisa6Q3UH99 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa6Q3UH99 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa6Q3UH99 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms