Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fndc4Q3TR08 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.04■□□□□ 0.64
Fndc4Q3TR08 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Fndc4Q3TR08 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fndc4Q3TR08 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.03■□□□□ 0.64
Fndc4Q3TR08 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Fndc4Q3TR08 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Fndc4Q3TR08 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fndc4Q3TR08 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.02■□□□□ 0.64
Fndc4Q3TR08 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fndc4Q3TR08 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.02■□□□□ 0.64
Fndc4Q3TR08 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fndc4Q3TR08 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Fndc4Q3TR08 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Fndc4Q3TR08 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fndc4Q3TR08 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fndc4Q3TR08 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fndc4Q3TR08 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fndc4Q3TR08 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Fndc4Q3TR08 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Fndc4Q3TR08 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Fndc4Q3TR08 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Fndc4Q3TR08 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fndc4Q3TR08 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.99■□□□□ 0.63
Fndc4Q3TR08 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fndc4Q3TR08 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fndc4Q3TR08 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fndc4Q3TR08 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Fndc4Q3TR08 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fndc4Q3TR08 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fndc4Q3TR08 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.97■□□□□ 0.63
Fndc4Q3TR08 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.97■□□□□ 0.63
Fndc4Q3TR08 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fndc4Q3TR08 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fndc4Q3TR08 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fndc4Q3TR08 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fndc4Q3TR08 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fndc4Q3TR08 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fndc4Q3TR08 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fndc4Q3TR08 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Fndc4Q3TR08 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fndc4Q3TR08 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Fndc4Q3TR08 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fndc4Q3TR08 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fndc4Q3TR08 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fndc4Q3TR08 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Fndc4Q3TR08 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fndc4Q3TR08 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fndc4Q3TR08 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.92■□□□□ 0.62
Fndc4Q3TR08 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fndc4Q3TR08 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fndc4Q3TR08 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.92■□□□□ 0.62
Fndc4Q3TR08 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Fndc4Q3TR08 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fndc4Q3TR08 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Fndc4Q3TR08 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fndc4Q3TR08 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fndc4Q3TR08 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Fndc4Q3TR08 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Fndc4Q3TR08 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fndc4Q3TR08 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fndc4Q3TR08 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fndc4Q3TR08 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fndc4Q3TR08 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fndc4Q3TR08 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Fndc4Q3TR08 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fndc4Q3TR08 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fndc4Q3TR08 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fndc4Q3TR08 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.87■□□□□ 0.61
Fndc4Q3TR08 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fndc4Q3TR08 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fndc4Q3TR08 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fndc4Q3TR08 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms