Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pkd1l3Q2EG98 Gm44428-201ENSMUST00000204474 874 ntBASIC20.33■□□□□ 0.85
Pkd1l3Q2EG98 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pkd1l3Q2EG98 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.33■□□□□ 0.85
Pkd1l3Q2EG98 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pkd1l3Q2EG98 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.33■□□□□ 0.84
Pkd1l3Q2EG98 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pkd1l3Q2EG98 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pkd1l3Q2EG98 Gm5812-201ENSMUST00000061073 957 ntBASIC20.33■□□□□ 0.84
Pkd1l3Q2EG98 Gm5921-201ENSMUST00000075898 882 ntBASIC20.33■□□□□ 0.84
Pkd1l3Q2EG98 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pkd1l3Q2EG98 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pkd1l3Q2EG98 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pkd1l3Q2EG98 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pkd1l3Q2EG98 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l3Q2EG98 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.3■□□□□ 0.84
Pkd1l3Q2EG98 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pkd1l3Q2EG98 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pkd1l3Q2EG98 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pkd1l3Q2EG98 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pkd1l3Q2EG98 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd1l3Q2EG98 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pkd1l3Q2EG98 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd1l3Q2EG98 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd1l3Q2EG98 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pkd1l3Q2EG98 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pkd1l3Q2EG98 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pkd1l3Q2EG98 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pkd1l3Q2EG98 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd1l3Q2EG98 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd1l3Q2EG98 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd1l3Q2EG98 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd1l3Q2EG98 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Pkd1l3Q2EG98 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd1l3Q2EG98 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd1l3Q2EG98 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pkd1l3Q2EG98 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pkd1l3Q2EG98 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pkd1l3Q2EG98 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pkd1l3Q2EG98 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pkd1l3Q2EG98 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pkd1l3Q2EG98 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Pkd1l3Q2EG98 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pkd1l3Q2EG98 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.23■□□□□ 0.83
Pkd1l3Q2EG98 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd1l3Q2EG98 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd1l3Q2EG98 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd1l3Q2EG98 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd1l3Q2EG98 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd1l3Q2EG98 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.21■□□□□ 0.83
Pkd1l3Q2EG98 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd1l3Q2EG98 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd1l3Q2EG98 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd1l3Q2EG98 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.21■□□□□ 0.83
Pkd1l3Q2EG98 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd1l3Q2EG98 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pkd1l3Q2EG98 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pkd1l3Q2EG98 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pkd1l3Q2EG98 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pkd1l3Q2EG98 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pkd1l3Q2EG98 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Pkd1l3Q2EG98 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pkd1l3Q2EG98 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pkd1l3Q2EG98 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pkd1l3Q2EG98 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pkd1l3Q2EG98 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Pkd1l3Q2EG98 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pkd1l3Q2EG98 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pkd1l3Q2EG98 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pkd1l3Q2EG98 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pkd1l3Q2EG98 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.16■□□□□ 0.82
Pkd1l3Q2EG98 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pkd1l3Q2EG98 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pkd1l3Q2EG98 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.15■□□□□ 0.82
Pkd1l3Q2EG98 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pkd1l3Q2EG98 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pkd1l3Q2EG98 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pkd1l3Q2EG98 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pkd1l3Q2EG98 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.13■□□□□ 0.81
Pkd1l3Q2EG98 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.13■□□□□ 0.81
Pkd1l3Q2EG98 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.13■□□□□ 0.81
Pkd1l3Q2EG98 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.13■□□□□ 0.81
Pkd1l3Q2EG98 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pkd1l3Q2EG98 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pkd1l3Q2EG98 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.11■□□□□ 0.81
Pkd1l3Q2EG98 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pkd1l3Q2EG98 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pkd1l3Q2EG98 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pkd1l3Q2EG98 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms