Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ptchd3Q0EEE2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd3Q0EEE2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd3Q0EEE2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Ptchd3Q0EEE2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ptchd3Q0EEE2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ptchd3Q0EEE2 Gm6821-201ENSMUST00000107540 542 ntBASIC21.65■■□□□ 1.06
Ptchd3Q0EEE2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptchd3Q0EEE2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptchd3Q0EEE2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.64■■□□□ 1.05
Ptchd3Q0EEE2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptchd3Q0EEE2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptchd3Q0EEE2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptchd3Q0EEE2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptchd3Q0EEE2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptchd3Q0EEE2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.63■■□□□ 1.05
Ptchd3Q0EEE2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.62■■□□□ 1.05
Ptchd3Q0EEE2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.62■■□□□ 1.05
Ptchd3Q0EEE2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptchd3Q0EEE2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd3Q0EEE2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd3Q0EEE2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptchd3Q0EEE2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptchd3Q0EEE2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptchd3Q0EEE2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptchd3Q0EEE2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptchd3Q0EEE2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
Ptchd3Q0EEE2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.59■■□□□ 1.05
Ptchd3Q0EEE2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Ptchd3Q0EEE2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ptchd3Q0EEE2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptchd3Q0EEE2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptchd3Q0EEE2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.58■■□□□ 1.05
Ptchd3Q0EEE2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ptchd3Q0EEE2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd3Q0EEE2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd3Q0EEE2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd3Q0EEE2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd3Q0EEE2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptchd3Q0EEE2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptchd3Q0EEE2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd3Q0EEE2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ptchd3Q0EEE2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd3Q0EEE2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.55■■□□□ 1.04
Ptchd3Q0EEE2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ptchd3Q0EEE2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd3Q0EEE2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptchd3Q0EEE2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ptchd3Q0EEE2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd3Q0EEE2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd3Q0EEE2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ptchd3Q0EEE2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptchd3Q0EEE2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ptchd3Q0EEE2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ptchd3Q0EEE2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ptchd3Q0EEE2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.52■■□□□ 1.04
Ptchd3Q0EEE2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ptchd3Q0EEE2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ptchd3Q0EEE2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd3Q0EEE2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ptchd3Q0EEE2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd3Q0EEE2 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.51■■□□□ 1.03
Ptchd3Q0EEE2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd3Q0EEE2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd3Q0EEE2 Gm8503-201ENSMUST00000118131 455 ntBASIC21.5■■□□□ 1.03
Ptchd3Q0EEE2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptchd3Q0EEE2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ptchd3Q0EEE2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.5■■□□□ 1.03
Ptchd3Q0EEE2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptchd3Q0EEE2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd3Q0EEE2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd3Q0EEE2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.49■■□□□ 1.03
Ptchd3Q0EEE2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.49■■□□□ 1.03
Ptchd3Q0EEE2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd3Q0EEE2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd3Q0EEE2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptchd3Q0EEE2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ptchd3Q0EEE2 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.48■■□□□ 1.03
Ptchd3Q0EEE2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd3Q0EEE2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd3Q0EEE2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd3Q0EEE2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ptchd3Q0EEE2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptchd3Q0EEE2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptchd3Q0EEE2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Ptchd3Q0EEE2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ptchd3Q0EEE2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ptchd3Q0EEE2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd3Q0EEE2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms