Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3f3aP84244 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3f3aP84244 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3f3aP84244 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3f3aP84244 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3f3aP84244 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H3f3aP84244 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
H3f3aP84244 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3f3aP84244 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3f3aP84244 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
H3f3aP84244 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
H3f3aP84244 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.04■□□□□ 0.8
H3f3aP84244 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3f3aP84244 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.03■□□□□ 0.8
H3f3aP84244 Gm16437-201ENSMUST00000025669 507 ntBASIC20.03■□□□□ 0.8
H3f3aP84244 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
H3f3aP84244 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3f3aP84244 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3f3aP84244 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3f3aP84244 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.02■□□□□ 0.8
H3f3aP84244 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3f3aP84244 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
H3f3aP84244 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
H3f3aP84244 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
H3f3aP84244 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
H3f3aP84244 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3f3aP84244 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
H3f3aP84244 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3f3aP84244 Gm11687-201ENSMUST00000118911 886 ntBASIC20■□□□□ 0.79
H3f3aP84244 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20■□□□□ 0.79
H3f3aP84244 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
H3f3aP84244 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3f3aP84244 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3f3aP84244 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
H3f3aP84244 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
H3f3aP84244 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3f3aP84244 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3f3aP84244 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
H3f3aP84244 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3f3aP84244 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H3f3aP84244 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3f3aP84244 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
H3f3aP84244 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
H3f3aP84244 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
H3f3aP84244 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3f3aP84244 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.97■□□□□ 0.79
H3f3aP84244 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.97■□□□□ 0.79
H3f3aP84244 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3f3aP84244 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3f3aP84244 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3f3aP84244 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.96■□□□□ 0.79
H3f3aP84244 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3f3aP84244 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
H3f3aP84244 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
H3f3aP84244 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.96■□□□□ 0.79
H3f3aP84244 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
H3f3aP84244 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3f3aP84244 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.95■□□□□ 0.78
H3f3aP84244 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3f3aP84244 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3f3aP84244 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3f3aP84244 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3f3aP84244 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3f3aP84244 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
H3f3aP84244 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3f3aP84244 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3f3aP84244 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H3f3aP84244 Mir6538-201ENSMUST00000183713 110 ntBASIC19.93■□□□□ 0.78
H3f3aP84244 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3f3aP84244 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
H3f3aP84244 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3f3aP84244 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
H3f3aP84244 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
H3f3aP84244 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
H3f3aP84244 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3f3aP84244 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3f3aP84244 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3f3aP84244 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3f3aP84244 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
H3f3aP84244 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3f3aP84244 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3f3aP84244 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
H3f3aP84244 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.91■□□□□ 0.78
H3f3aP84244 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3f3aP84244 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3f3aP84244 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.9■□□□□ 0.78
H3f3aP84244 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
H3f3aP84244 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
H3f3aP84244 Gm44428-201ENSMUST00000204474 874 ntBASIC19.89■□□□□ 0.77
H3f3aP84244 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.89■□□□□ 0.77
H3f3aP84244 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.88■□□□□ 0.77
H3f3aP84244 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3f3aP84244 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.88■□□□□ 0.77
H3f3aP84244 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.87■□□□□ 0.77
H3f3aP84244 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3f3aP84244 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H3f3aP84244 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.87■□□□□ 0.77
H3f3aP84244 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H3f3aP84244 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.87■□□□□ 0.77
H3f3aP84244 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 862.2 ms