Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SgcaP82350 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcaP82350 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcaP82350 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SgcaP82350 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SgcaP82350 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.79■□□□□ 0.6
SgcaP82350 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.79■□□□□ 0.6
SgcaP82350 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcaP82350 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcaP82350 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SgcaP82350 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SgcaP82350 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SgcaP82350 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SgcaP82350 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SgcaP82350 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SgcaP82350 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SgcaP82350 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.76■□□□□ 0.59
SgcaP82350 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.76■□□□□ 0.59
SgcaP82350 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcaP82350 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SgcaP82350 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcaP82350 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcaP82350 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SgcaP82350 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SgcaP82350 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SgcaP82350 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SgcaP82350 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SgcaP82350 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SgcaP82350 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.74■□□□□ 0.59
SgcaP82350 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.74■□□□□ 0.59
SgcaP82350 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcaP82350 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SgcaP82350 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
SgcaP82350 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SgcaP82350 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SgcaP82350 Gm30023-201ENSMUST00000197970 889 ntBASIC18.72■□□□□ 0.59
SgcaP82350 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SgcaP82350 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SgcaP82350 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SgcaP82350 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SgcaP82350 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcaP82350 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SgcaP82350 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SgcaP82350 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcaP82350 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.71■□□□□ 0.59
SgcaP82350 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.71■□□□□ 0.59
SgcaP82350 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcaP82350 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcaP82350 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SgcaP82350 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SgcaP82350 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SgcaP82350 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SgcaP82350 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcaP82350 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcaP82350 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SgcaP82350 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SgcaP82350 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SgcaP82350 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcaP82350 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SgcaP82350 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SgcaP82350 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SgcaP82350 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.68■□□□□ 0.58
SgcaP82350 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SgcaP82350 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.67■□□□□ 0.58
SgcaP82350 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SgcaP82350 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcaP82350 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcaP82350 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SgcaP82350 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SgcaP82350 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcaP82350 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcaP82350 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcaP82350 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcaP82350 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SgcaP82350 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcaP82350 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.66■□□□□ 0.58
SgcaP82350 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.66■□□□□ 0.58
SgcaP82350 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcaP82350 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcaP82350 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.65■□□□□ 0.58
SgcaP82350 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcaP82350 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcaP82350 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcaP82350 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcaP82350 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcaP82350 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcaP82350 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcaP82350 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcaP82350 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SgcaP82350 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcaP82350 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SgcaP82350 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcaP82350 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SgcaP82350 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.63■□□□□ 0.57
SgcaP82350 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SgcaP82350 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcaP82350 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcaP82350 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcaP82350 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcaP82350 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms