Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Six5P70178 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.02■□□□□ 0.96
Six5P70178 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six5P70178 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six5P70178 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Six5P70178 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six5P70178 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.01■□□□□ 0.95
Six5P70178 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21■□□□□ 0.95
Six5P70178 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.99■□□□□ 0.95
Six5P70178 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six5P70178 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six5P70178 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six5P70178 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Six5P70178 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.97■□□□□ 0.95
Six5P70178 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Six5P70178 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.97■□□□□ 0.95
Six5P70178 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Six5P70178 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six5P70178 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six5P70178 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Six5P70178 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Six5P70178 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Six5P70178 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Six5P70178 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six5P70178 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Six5P70178 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.95■□□□□ 0.94
Six5P70178 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Six5P70178 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Gm9806-201ENSMUST00000051080 552 ntBASIC20.94■□□□□ 0.94
Six5P70178 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.93■□□□□ 0.94
Six5P70178 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Six5P70178 Scarna2-201ENSMUST00000157560 414 ntBASIC20.92■□□□□ 0.94
Six5P70178 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six5P70178 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six5P70178 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Six5P70178 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six5P70178 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.91■□□□□ 0.94
Six5P70178 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six5P70178 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Six5P70178 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six5P70178 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.9■□□□□ 0.94
Six5P70178 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six5P70178 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Six5P70178 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Six5P70178 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Six5P70178 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Six5P70178 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Six5P70178 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Six5P70178 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six5P70178 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Six5P70178 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six5P70178 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six5P70178 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six5P70178 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six5P70178 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.87■□□□□ 0.93
Six5P70178 Gm11687-201ENSMUST00000118911 886 ntBASIC20.87■□□□□ 0.93
Six5P70178 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Six5P70178 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six5P70178 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Six5P70178 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six5P70178 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.87■□□□□ 0.93
Six5P70178 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.87■□□□□ 0.93
Six5P70178 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six5P70178 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six5P70178 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Six5P70178 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.86■□□□□ 0.93
Six5P70178 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six5P70178 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six5P70178 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Six5P70178 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six5P70178 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six5P70178 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Six5P70178 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Six5P70178 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Six5P70178 Gm16437-201ENSMUST00000025669 507 ntBASIC20.84■□□□□ 0.93
Six5P70178 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Six5P70178 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms