Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Six5P70178 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.02■□□□□ 0.96
Six5P70178 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six5P70178 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six5P70178 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Six5P70178 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six5P70178 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.01■□□□□ 0.95
Six5P70178 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Six5P70178 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21■□□□□ 0.95
Six5P70178 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.99■□□□□ 0.95
Six5P70178 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six5P70178 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six5P70178 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six5P70178 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six5P70178 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Six5P70178 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.97■□□□□ 0.95
Six5P70178 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Six5P70178 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.97■□□□□ 0.95
Six5P70178 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Six5P70178 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six5P70178 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six5P70178 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Six5P70178 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Six5P70178 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Six5P70178 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Six5P70178 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six5P70178 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Six5P70178 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.95■□□□□ 0.94
Six5P70178 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Six5P70178 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Gm9806-201ENSMUST00000051080 552 ntBASIC20.94■□□□□ 0.94
Six5P70178 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six5P70178 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.93■□□□□ 0.94
Six5P70178 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six5P70178 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Six5P70178 Scarna2-201ENSMUST00000157560 414 ntBASIC20.92■□□□□ 0.94
Six5P70178 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six5P70178 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six5P70178 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Six5P70178 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six5P70178 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.91■□□□□ 0.94
Six5P70178 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six5P70178 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Six5P70178 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six5P70178 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.9■□□□□ 0.94
Six5P70178 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six5P70178 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Six5P70178 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Six5P70178 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Six5P70178 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Six5P70178 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Six5P70178 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Six5P70178 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six5P70178 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Six5P70178 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six5P70178 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six5P70178 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six5P70178 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six5P70178 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.87■□□□□ 0.93
Six5P70178 Gm11687-201ENSMUST00000118911 886 ntBASIC20.87■□□□□ 0.93
Six5P70178 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Six5P70178 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six5P70178 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Six5P70178 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six5P70178 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.87■□□□□ 0.93
Six5P70178 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.87■□□□□ 0.93
Six5P70178 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six5P70178 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six5P70178 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Six5P70178 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.86■□□□□ 0.93
Six5P70178 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six5P70178 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six5P70178 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Six5P70178 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six5P70178 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six5P70178 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Six5P70178 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Six5P70178 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Six5P70178 Gm16437-201ENSMUST00000025669 507 ntBASIC20.84■□□□□ 0.93
Six5P70178 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Six5P70178 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms