Protein–RNA interactions for Protein: P63013

Prrx1, Paired mesoderm homeobox protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrx1P63013 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prrx1P63013 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
Prrx1P63013 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prrx1P63013 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prrx1P63013 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Prrx1P63013 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Prrx1P63013 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prrx1P63013 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prrx1P63013 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Prrx1P63013 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Prrx1P63013 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.44■□□□□ 0.54
Prrx1P63013 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrx1P63013 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrx1P63013 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrx1P63013 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrx1P63013 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
Prrx1P63013 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.42■□□□□ 0.54
Prrx1P63013 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prrx1P63013 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrx1P63013 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prrx1P63013 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prrx1P63013 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.41■□□□□ 0.54
Prrx1P63013 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Terc-201ENSMUST00000082862 423 ntBASIC18.41■□□□□ 0.54
Prrx1P63013 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrx1P63013 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrx1P63013 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.39■□□□□ 0.53
Prrx1P63013 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.39■□□□□ 0.53
Prrx1P63013 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Prrx1P63013 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Prrx1P63013 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.38■□□□□ 0.53
Prrx1P63013 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.38■□□□□ 0.53
Prrx1P63013 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.37■□□□□ 0.53
Prrx1P63013 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Prrx1P63013 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.37■□□□□ 0.53
Prrx1P63013 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prrx1P63013 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.36■□□□□ 0.53
Prrx1P63013 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Prrx1P63013 Scarna2-201ENSMUST00000157560 414 ntBASIC18.36■□□□□ 0.53
Prrx1P63013 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Prrx1P63013 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prrx1P63013 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prrx1P63013 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prrx1P63013 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Gm9806-201ENSMUST00000051080 552 ntBASIC18.35■□□□□ 0.53
Prrx1P63013 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Prrx1P63013 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Prrx1P63013 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prrx1P63013 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prrx1P63013 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prrx1P63013 Gm11687-201ENSMUST00000118911 886 ntBASIC18.33■□□□□ 0.52
Prrx1P63013 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.33■□□□□ 0.52
Prrx1P63013 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prrx1P63013 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prrx1P63013 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Prrx1P63013 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms