Protein–RNA interactions for Protein: P63013

Prrx1, Paired mesoderm homeobox protein 1, mousemouse

Predictions only

Length 245 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrx1P63013 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prrx1P63013 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
Prrx1P63013 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prrx1P63013 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prrx1P63013 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Prrx1P63013 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Prrx1P63013 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prrx1P63013 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prrx1P63013 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Prrx1P63013 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Prrx1P63013 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrx1P63013 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.44■□□□□ 0.54
Prrx1P63013 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrx1P63013 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrx1P63013 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrx1P63013 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrx1P63013 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
Prrx1P63013 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrx1P63013 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.42■□□□□ 0.54
Prrx1P63013 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prrx1P63013 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrx1P63013 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prrx1P63013 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prrx1P63013 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.41■□□□□ 0.54
Prrx1P63013 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prrx1P63013 Terc-201ENSMUST00000082862 423 ntBASIC18.41■□□□□ 0.54
Prrx1P63013 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrx1P63013 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrx1P63013 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.39■□□□□ 0.53
Prrx1P63013 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.39■□□□□ 0.53
Prrx1P63013 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Prrx1P63013 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prrx1P63013 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Prrx1P63013 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.38■□□□□ 0.53
Prrx1P63013 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.38■□□□□ 0.53
Prrx1P63013 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prrx1P63013 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prrx1P63013 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.37■□□□□ 0.53
Prrx1P63013 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Prrx1P63013 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.37■□□□□ 0.53
Prrx1P63013 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prrx1P63013 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.36■□□□□ 0.53
Prrx1P63013 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Prrx1P63013 Scarna2-201ENSMUST00000157560 414 ntBASIC18.36■□□□□ 0.53
Prrx1P63013 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Prrx1P63013 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prrx1P63013 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prrx1P63013 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prrx1P63013 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Gm9806-201ENSMUST00000051080 552 ntBASIC18.35■□□□□ 0.53
Prrx1P63013 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Prrx1P63013 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prrx1P63013 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prrx1P63013 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Prrx1P63013 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prrx1P63013 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prrx1P63013 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prrx1P63013 Gm11687-201ENSMUST00000118911 886 ntBASIC18.33■□□□□ 0.52
Prrx1P63013 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.33■□□□□ 0.52
Prrx1P63013 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prrx1P63013 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prrx1P63013 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Prrx1P63013 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms