Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne2P59108 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne2P59108 Gm30023-201ENSMUST00000197970 889 ntBASIC18.8■□□□□ 0.6
Cpne2P59108 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne2P59108 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne2P59108 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne2P59108 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne2P59108 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cpne2P59108 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cpne2P59108 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne2P59108 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne2P59108 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne2P59108 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cpne2P59108 Particl-201ENSMUST00000205370 1560 ntBASIC18.78■□□□□ 0.6
Cpne2P59108 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne2P59108 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne2P59108 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cpne2P59108 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.78■□□□□ 0.6
Cpne2P59108 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne2P59108 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne2P59108 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne2P59108 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne2P59108 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cpne2P59108 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne2P59108 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne2P59108 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne2P59108 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne2P59108 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpne2P59108 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Cpne2P59108 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cpne2P59108 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cpne2P59108 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne2P59108 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne2P59108 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne2P59108 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Cpne2P59108 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne2P59108 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Cpne2P59108 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cpne2P59108 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.75■□□□□ 0.59
Cpne2P59108 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne2P59108 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne2P59108 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Cpne2P59108 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne2P59108 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne2P59108 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cpne2P59108 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne2P59108 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.74■□□□□ 0.59
Cpne2P59108 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cpne2P59108 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cpne2P59108 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.73■□□□□ 0.59
Cpne2P59108 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne2P59108 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne2P59108 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne2P59108 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.72■□□□□ 0.59
Cpne2P59108 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.72■□□□□ 0.59
Cpne2P59108 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cpne2P59108 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.72■□□□□ 0.59
Cpne2P59108 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne2P59108 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Cpne2P59108 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne2P59108 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne2P59108 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne2P59108 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne2P59108 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne2P59108 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne2P59108 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne2P59108 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cpne2P59108 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cpne2P59108 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne2P59108 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne2P59108 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne2P59108 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne2P59108 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne2P59108 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cpne2P59108 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne2P59108 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Cpne2P59108 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne2P59108 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne2P59108 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne2P59108 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne2P59108 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne2P59108 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cpne2P59108 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne2P59108 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne2P59108 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne2P59108 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne2P59108 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne2P59108 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.67■□□□□ 0.58
Cpne2P59108 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne2P59108 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne2P59108 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne2P59108 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne2P59108 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne2P59108 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne2P59108 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne2P59108 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne2P59108 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne2P59108 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne2P59108 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne2P59108 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms