Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cks2P56390 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cks2P56390 Gm37136-201ENSMUST00000194368 194 ntBASIC18.7■□□□□ 0.58
Cks2P56390 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.69■□□□□ 0.58
Cks2P56390 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cks2P56390 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cks2P56390 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cks2P56390 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cks2P56390 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cks2P56390 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.68■□□□□ 0.58
Cks2P56390 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cks2P56390 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cks2P56390 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cks2P56390 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.68■□□□□ 0.58
Cks2P56390 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cks2P56390 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Cks2P56390 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cks2P56390 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Cks2P56390 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cks2P56390 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cks2P56390 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cks2P56390 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cks2P56390 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cks2P56390 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Cks2P56390 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks2P56390 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cks2P56390 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks2P56390 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cks2P56390 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks2P56390 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks2P56390 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cks2P56390 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cks2P56390 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cks2P56390 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cks2P56390 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cks2P56390 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.65■□□□□ 0.58
Cks2P56390 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cks2P56390 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cks2P56390 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cks2P56390 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks2P56390 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks2P56390 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks2P56390 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks2P56390 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks2P56390 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cks2P56390 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks2P56390 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks2P56390 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cks2P56390 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks2P56390 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks2P56390 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks2P56390 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks2P56390 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks2P56390 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Cks2P56390 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cks2P56390 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cks2P56390 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cks2P56390 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cks2P56390 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cks2P56390 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cks2P56390 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.62■□□□□ 0.57
Cks2P56390 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cks2P56390 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cks2P56390 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cks2P56390 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cks2P56390 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cks2P56390 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cks2P56390 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks2P56390 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.6■□□□□ 0.57
Cks2P56390 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks2P56390 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks2P56390 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cks2P56390 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.6■□□□□ 0.57
Cks2P56390 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.6■□□□□ 0.57
Cks2P56390 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cks2P56390 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.6■□□□□ 0.57
Cks2P56390 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks2P56390 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cks2P56390 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks2P56390 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks2P56390 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.59■□□□□ 0.57
Cks2P56390 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cks2P56390 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cks2P56390 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cks2P56390 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cks2P56390 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cks2P56390 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cks2P56390 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cks2P56390 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cks2P56390 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cks2P56390 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cks2P56390 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cks2P56390 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.58■□□□□ 0.56
Cks2P56390 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.58■□□□□ 0.56
Cks2P56390 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cks2P56390 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cks2P56390 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cks2P56390 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cks2P56390 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.57■□□□□ 0.56
Cks2P56390 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 438.9 ms