Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rph3aP47708 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rph3aP47708 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.55■■□□□ 1.04
Rph3aP47708 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rph3aP47708 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rph3aP47708 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rph3aP47708 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rph3aP47708 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.54■■□□□ 1.04
Rph3aP47708 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.54■■□□□ 1.04
Rph3aP47708 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rph3aP47708 Terc-201ENSMUST00000082862 423 ntBASIC21.54■■□□□ 1.04
Rph3aP47708 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rph3aP47708 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rph3aP47708 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rph3aP47708 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rph3aP47708 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.53■■□□□ 1.04
Rph3aP47708 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Rph3aP47708 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rph3aP47708 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rph3aP47708 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rph3aP47708 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rph3aP47708 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.52■■□□□ 1.04
Rph3aP47708 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rph3aP47708 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rph3aP47708 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rph3aP47708 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rph3aP47708 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rph3aP47708 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.51■■□□□ 1.03
Rph3aP47708 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rph3aP47708 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rph3aP47708 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rph3aP47708 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rph3aP47708 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.5■■□□□ 1.03
Rph3aP47708 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rph3aP47708 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rph3aP47708 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rph3aP47708 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rph3aP47708 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.49■■□□□ 1.03
Rph3aP47708 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rph3aP47708 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Rph3aP47708 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rph3aP47708 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rph3aP47708 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rph3aP47708 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rph3aP47708 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rph3aP47708 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.47■■□□□ 1.03
Rph3aP47708 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rph3aP47708 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rph3aP47708 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Rph3aP47708 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rph3aP47708 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Rph3aP47708 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rph3aP47708 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rph3aP47708 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rph3aP47708 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rph3aP47708 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.45■■□□□ 1.02
Rph3aP47708 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rph3aP47708 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.45■■□□□ 1.02
Rph3aP47708 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rph3aP47708 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rph3aP47708 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rph3aP47708 Scarna2-201ENSMUST00000157560 414 ntBASIC21.44■■□□□ 1.02
Rph3aP47708 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rph3aP47708 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rph3aP47708 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rph3aP47708 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rph3aP47708 Gm9806-201ENSMUST00000051080 552 ntBASIC21.43■■□□□ 1.02
Rph3aP47708 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rph3aP47708 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rph3aP47708 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rph3aP47708 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rph3aP47708 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Rph3aP47708 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rph3aP47708 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rph3aP47708 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rph3aP47708 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rph3aP47708 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.41■■□□□ 1.02
Rph3aP47708 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rph3aP47708 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rph3aP47708 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rph3aP47708 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rph3aP47708 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.41■■□□□ 1.02
Rph3aP47708 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rph3aP47708 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Rph3aP47708 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.4■■□□□ 1.02
Rph3aP47708 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rph3aP47708 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rph3aP47708 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rph3aP47708 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rph3aP47708 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rph3aP47708 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rph3aP47708 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Rph3aP47708 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rph3aP47708 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rph3aP47708 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rph3aP47708 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rph3aP47708 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rph3aP47708 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rph3aP47708 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.38■■□□□ 1.01
Rph3aP47708 Gm16437-201ENSMUST00000025669 507 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms