Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-2P42586 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Nkx2-2P42586 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-2P42586 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-2P42586 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-2P42586 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-2P42586 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-2P42586 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-2P42586 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-2P42586 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-2P42586 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-2P42586 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-2P42586 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-2P42586 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nkx2-2P42586 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.73■□□□□ 0.91
Nkx2-2P42586 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx2-2P42586 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
Nkx2-2P42586 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.71■□□□□ 0.91
Nkx2-2P42586 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.71■□□□□ 0.91
Nkx2-2P42586 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-2P42586 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-2P42586 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-2P42586 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.7■□□□□ 0.9
Nkx2-2P42586 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Nkx2-2P42586 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-2P42586 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Nkx2-2P42586 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-2P42586 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.7■□□□□ 0.9
Nkx2-2P42586 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-2P42586 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-2P42586 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.69■□□□□ 0.9
Nkx2-2P42586 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-2P42586 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nkx2-2P42586 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-2P42586 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-2P42586 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-2P42586 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-2P42586 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nkx2-2P42586 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.68■□□□□ 0.9
Nkx2-2P42586 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-2P42586 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-2P42586 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx2-2P42586 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-2P42586 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-2P42586 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-2P42586 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-2P42586 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-2P42586 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-2P42586 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-2P42586 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.66■□□□□ 0.9
Nkx2-2P42586 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-2P42586 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-2P42586 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkx2-2P42586 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Nkx2-2P42586 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-2P42586 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx2-2P42586 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx2-2P42586 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-2P42586 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-2P42586 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-2P42586 Scarna2-201ENSMUST00000157560 414 ntBASIC20.63■□□□□ 0.89
Nkx2-2P42586 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-2P42586 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-2P42586 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Nkx2-2P42586 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-2P42586 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-2P42586 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-2P42586 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-2P42586 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-2P42586 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Gm9806-201ENSMUST00000051080 552 ntBASIC20.61■□□□□ 0.89
Nkx2-2P42586 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-2P42586 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-2P42586 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-2P42586 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-2P42586 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.6■□□□□ 0.89
Nkx2-2P42586 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.6■□□□□ 0.89
Nkx2-2P42586 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkx2-2P42586 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.59■□□□□ 0.89
Nkx2-2P42586 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-2P42586 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nkx2-2P42586 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nkx2-2P42586 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.58■□□□□ 0.89
Nkx2-2P42586 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Nkx2-2P42586 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.58■□□□□ 0.89
Nkx2-2P42586 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-2P42586 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx2-2P42586 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx2-2P42586 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms