Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col8a2P25318 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col8a2P25318 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col8a2P25318 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col8a2P25318 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col8a2P25318 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.93■□□□□ 0.62
Col8a2P25318 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col8a2P25318 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col8a2P25318 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col8a2P25318 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col8a2P25318 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col8a2P25318 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.93■□□□□ 0.62
Col8a2P25318 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col8a2P25318 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col8a2P25318 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col8a2P25318 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col8a2P25318 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col8a2P25318 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col8a2P25318 Gm14523-201ENSMUST00000117260 558 ntBASIC18.9■□□□□ 0.62
Col8a2P25318 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.9■□□□□ 0.62
Col8a2P25318 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.9■□□□□ 0.62
Col8a2P25318 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col8a2P25318 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col8a2P25318 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col8a2P25318 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col8a2P25318 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col8a2P25318 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col8a2P25318 Gm7332-201ENSMUST00000118351 454 ntBASIC18.88■□□□□ 0.61
Col8a2P25318 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col8a2P25318 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col8a2P25318 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Col8a2P25318 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col8a2P25318 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col8a2P25318 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col8a2P25318 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.87■□□□□ 0.61
Col8a2P25318 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col8a2P25318 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Col8a2P25318 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col8a2P25318 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col8a2P25318 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.86■□□□□ 0.61
Col8a2P25318 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col8a2P25318 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col8a2P25318 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col8a2P25318 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.85■□□□□ 0.61
Col8a2P25318 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col8a2P25318 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.85■□□□□ 0.61
Col8a2P25318 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col8a2P25318 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col8a2P25318 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col8a2P25318 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col8a2P25318 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col8a2P25318 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.84■□□□□ 0.61
Col8a2P25318 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col8a2P25318 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col8a2P25318 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col8a2P25318 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Col8a2P25318 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Col8a2P25318 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col8a2P25318 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col8a2P25318 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col8a2P25318 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Col8a2P25318 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col8a2P25318 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col8a2P25318 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col8a2P25318 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col8a2P25318 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col8a2P25318 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col8a2P25318 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col8a2P25318 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col8a2P25318 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Col8a2P25318 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col8a2P25318 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.8■□□□□ 0.6
Col8a2P25318 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col8a2P25318 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col8a2P25318 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col8a2P25318 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col8a2P25318 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col8a2P25318 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col8a2P25318 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col8a2P25318 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col8a2P25318 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col8a2P25318 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col8a2P25318 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col8a2P25318 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col8a2P25318 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Col8a2P25318 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.78■□□□□ 0.6
Col8a2P25318 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col8a2P25318 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col8a2P25318 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Col8a2P25318 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col8a2P25318 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col8a2P25318 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.77■□□□□ 0.6
Col8a2P25318 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.77■□□□□ 0.6
Col8a2P25318 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col8a2P25318 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col8a2P25318 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col8a2P25318 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col8a2P25318 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col8a2P25318 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col8a2P25318 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms