Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.84■□□□□ 0.93
Tnfrsf1bP25119 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf1bP25119 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Tnfrsf1bP25119 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Tnfrsf1bP25119 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf1bP25119 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Tnfrsf1bP25119 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf1bP25119 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf1bP25119 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfrsf1bP25119 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfrsf1bP25119 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf1bP25119 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf1bP25119 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf1bP25119 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf1bP25119 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.82■□□□□ 0.92
Tnfrsf1bP25119 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf1bP25119 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.81■□□□□ 0.92
Tnfrsf1bP25119 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf1bP25119 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Tnfrsf1bP25119 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf1bP25119 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf1bP25119 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf1bP25119 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf1bP25119 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf1bP25119 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.79■□□□□ 0.92
Tnfrsf1bP25119 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf1bP25119 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf1bP25119 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf1bP25119 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf1bP25119 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf1bP25119 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.77■□□□□ 0.92
Tnfrsf1bP25119 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Tnfrsf1bP25119 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tnfrsf1bP25119 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.76■□□□□ 0.91
Tnfrsf1bP25119 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tnfrsf1bP25119 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf1bP25119 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf1bP25119 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf1bP25119 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf1bP25119 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf1bP25119 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.74■□□□□ 0.91
Tnfrsf1bP25119 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.74■□□□□ 0.91
Tnfrsf1bP25119 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf1bP25119 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfrsf1bP25119 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf1bP25119 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.74■□□□□ 0.91
Tnfrsf1bP25119 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf1bP25119 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.73■□□□□ 0.91
Tnfrsf1bP25119 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf1bP25119 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tnfrsf1bP25119 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf1bP25119 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Gm27502-201ENSMUST00000183495 199 ntBASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tnfrsf1bP25119 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.71■□□□□ 0.91
Tnfrsf1bP25119 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf1bP25119 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf1bP25119 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf1bP25119 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.7■□□□□ 0.9
Tnfrsf1bP25119 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf1bP25119 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf1bP25119 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf1bP25119 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf1bP25119 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf1bP25119 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnfrsf1bP25119 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.7■□□□□ 0.9
Tnfrsf1bP25119 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf1bP25119 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf1bP25119 Gm44428-201ENSMUST00000204474 874 ntBASIC20.69■□□□□ 0.9
Tnfrsf1bP25119 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.69■□□□□ 0.9
Tnfrsf1bP25119 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf1bP25119 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf1bP25119 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Tnfrsf1bP25119 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tnfrsf1bP25119 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfrsf1bP25119 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf1bP25119 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf1bP25119 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf1bP25119 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf1bP25119 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf1bP25119 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf1bP25119 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf1bP25119 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf1bP25119 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.66■□□□□ 0.9
Tnfrsf1bP25119 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.66■□□□□ 0.9
Tnfrsf1bP25119 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf1bP25119 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf1bP25119 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf1bP25119 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf1bP25119 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tnfrsf1bP25119 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.65■□□□□ 0.9
Tnfrsf1bP25119 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tnfrsf1bP25119 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms