Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf9P20334 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf9P20334 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf9P20334 Gm5921-201ENSMUST00000075898 882 ntBASIC18.08■□□□□ 0.48
Tnfrsf9P20334 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf9P20334 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf9P20334 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Tnfrsf9P20334 Gm15546-201ENSMUST00000122095 826 ntBASIC18.07■□□□□ 0.48
Tnfrsf9P20334 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf9P20334 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf9P20334 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf9P20334 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf9P20334 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf9P20334 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.05■□□□□ 0.48
Tnfrsf9P20334 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.05■□□□□ 0.48
Tnfrsf9P20334 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf9P20334 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.05■□□□□ 0.48
Tnfrsf9P20334 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf9P20334 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf9P20334 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf9P20334 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf9P20334 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.04■□□□□ 0.48
Tnfrsf9P20334 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf9P20334 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf9P20334 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf9P20334 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.03■□□□□ 0.48
Tnfrsf9P20334 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tnfrsf9P20334 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf9P20334 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf9P20334 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Tnfrsf9P20334 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tnfrsf9P20334 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf9P20334 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf9P20334 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf9P20334 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.01■□□□□ 0.47
Tnfrsf9P20334 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf9P20334 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf9P20334 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf9P20334 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tnfrsf9P20334 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf9P20334 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf9P20334 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf9P20334 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18■□□□□ 0.47
Tnfrsf9P20334 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.99■□□□□ 0.47
Tnfrsf9P20334 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf9P20334 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Tnfrsf9P20334 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf9P20334 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf9P20334 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf9P20334 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf9P20334 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf9P20334 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf9P20334 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf9P20334 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.97■□□□□ 0.47
Tnfrsf9P20334 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf9P20334 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.97■□□□□ 0.47
Tnfrsf9P20334 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf9P20334 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf9P20334 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf9P20334 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf9P20334 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf9P20334 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf9P20334 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.96■□□□□ 0.47
Tnfrsf9P20334 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.96■□□□□ 0.47
Tnfrsf9P20334 Gm9812-201ENSMUST00000061934 968 ntBASIC17.96■□□□□ 0.47
Tnfrsf9P20334 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf9P20334 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf9P20334 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Tnfrsf9P20334 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Tnfrsf9P20334 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Tnfrsf9P20334 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf9P20334 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf9P20334 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf9P20334 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Tnfrsf9P20334 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.94■□□□□ 0.46
Tnfrsf9P20334 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf9P20334 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.93■□□□□ 0.46
Tnfrsf9P20334 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tnfrsf9P20334 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfrsf9P20334 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Tnfrsf9P20334 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Tnfrsf9P20334 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf9P20334 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.92■□□□□ 0.46
Tnfrsf9P20334 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf9P20334 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf9P20334 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfrsf9P20334 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tnfrsf9P20334 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf9P20334 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms