Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.55■□□□□ 0.88
Irf1P15314 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf1P15314 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Irf1P15314 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf1P15314 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Irf1P15314 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Irf1P15314 Gm27502-201ENSMUST00000183495 199 ntBASIC20.54■□□□□ 0.88
Irf1P15314 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.54■□□□□ 0.88
Irf1P15314 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.54■□□□□ 0.88
Irf1P15314 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf1P15314 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Irf1P15314 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf1P15314 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf1P15314 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf1P15314 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Irf1P15314 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf1P15314 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf1P15314 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.52■□□□□ 0.88
Irf1P15314 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Irf1P15314 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf1P15314 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Irf1P15314 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.52■□□□□ 0.88
Irf1P15314 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.51■□□□□ 0.87
Irf1P15314 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Irf1P15314 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf1P15314 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf1P15314 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Irf1P15314 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf1P15314 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Irf1P15314 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf1P15314 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Irf1P15314 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf1P15314 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Irf1P15314 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf1P15314 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Irf1P15314 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf1P15314 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf1P15314 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf1P15314 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.48■□□□□ 0.87
Irf1P15314 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf1P15314 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf1P15314 Terc-201ENSMUST00000082862 423 ntBASIC20.47■□□□□ 0.87
Irf1P15314 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf1P15314 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf1P15314 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf1P15314 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf1P15314 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf1P15314 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.46■□□□□ 0.87
Irf1P15314 Gm12366-201ENSMUST00000121722 873 ntBASIC20.46■□□□□ 0.87
Irf1P15314 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.46■□□□□ 0.87
Irf1P15314 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf1P15314 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.46■□□□□ 0.87
Irf1P15314 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf1P15314 Gm5786-201ENSMUST00000085368 882 ntBASIC20.46■□□□□ 0.87
Irf1P15314 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Irf1P15314 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Irf1P15314 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Irf1P15314 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf1P15314 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf1P15314 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf1P15314 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Irf1P15314 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Irf1P15314 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf1P15314 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf1P15314 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Irf1P15314 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Irf1P15314 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Irf1P15314 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf1P15314 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Irf1P15314 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.42■□□□□ 0.86
Irf1P15314 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Irf1P15314 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf1P15314 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf1P15314 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.42■□□□□ 0.86
Irf1P15314 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf1P15314 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf1P15314 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Irf1P15314 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Irf1P15314 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf1P15314 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf1P15314 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Irf1P15314 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf1P15314 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Irf1P15314 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.4■□□□□ 0.86
Irf1P15314 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf1P15314 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf1P15314 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf1P15314 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.39■□□□□ 0.85
Irf1P15314 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Irf1P15314 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf1P15314 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf1P15314 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.38■□□□□ 0.85
Irf1P15314 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf1P15314 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf1P15314 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Irf1P15314 Gm7332-201ENSMUST00000118351 454 ntBASIC20.37■□□□□ 0.85
Irf1P15314 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Irf1P15314 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.37■□□□□ 0.85
Irf1P15314 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Irf1P15314 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms