Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.59■□□□□ 0.89
Cdh3P10287 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Cdh3P10287 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cdh3P10287 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cdh3P10287 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh3P10287 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Cdh3P10287 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh3P10287 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh3P10287 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cdh3P10287 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh3P10287 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh3P10287 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.58■□□□□ 0.88
Cdh3P10287 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh3P10287 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdh3P10287 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.57■□□□□ 0.88
Cdh3P10287 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh3P10287 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh3P10287 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh3P10287 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh3P10287 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh3P10287 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdh3P10287 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh3P10287 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh3P10287 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.54■□□□□ 0.88
Cdh3P10287 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh3P10287 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.54■□□□□ 0.88
Cdh3P10287 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cdh3P10287 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh3P10287 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh3P10287 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh3P10287 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh3P10287 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh3P10287 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.53■□□□□ 0.88
Cdh3P10287 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdh3P10287 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh3P10287 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh3P10287 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cdh3P10287 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh3P10287 Gm11599-201ENSMUST00000118720 878 ntBASIC20.52■□□□□ 0.88
Cdh3P10287 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Cdh3P10287 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cdh3P10287 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh3P10287 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh3P10287 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh3P10287 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh3P10287 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh3P10287 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdh3P10287 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh3P10287 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.5■□□□□ 0.87
Cdh3P10287 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cdh3P10287 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.5■□□□□ 0.87
Cdh3P10287 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.5■□□□□ 0.87
Cdh3P10287 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh3P10287 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cdh3P10287 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh3P10287 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cdh3P10287 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh3P10287 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cdh3P10287 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh3P10287 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh3P10287 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.47■□□□□ 0.87
Cdh3P10287 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.47■□□□□ 0.87
Cdh3P10287 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh3P10287 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh3P10287 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh3P10287 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh3P10287 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cdh3P10287 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh3P10287 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cdh3P10287 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh3P10287 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh3P10287 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh3P10287 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh3P10287 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh3P10287 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cdh3P10287 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh3P10287 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cdh3P10287 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cdh3P10287 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh3P10287 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cdh3P10287 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Cdh3P10287 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh3P10287 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.43■□□□□ 0.86
Cdh3P10287 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh3P10287 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh3P10287 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh3P10287 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh3P10287 Notumos-201ENSMUST00000151998 2659 ntBASIC20.42■□□□□ 0.86
Cdh3P10287 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh3P10287 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh3P10287 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh3P10287 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh3P10287 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh3P10287 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh3P10287 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh3P10287 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh3P10287 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh3P10287 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh3P10287 Gm37136-201ENSMUST00000194368 194 ntBASIC20.4■□□□□ 0.86
Cdh3P10287 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms