Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UbbP0CG49 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UbbP0CG49 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UbbP0CG49 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UbbP0CG49 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UbbP0CG49 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.48■□□□□ 0.71
UbbP0CG49 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UbbP0CG49 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UbbP0CG49 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.47■□□□□ 0.71
UbbP0CG49 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UbbP0CG49 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UbbP0CG49 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UbbP0CG49 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
UbbP0CG49 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UbbP0CG49 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UbbP0CG49 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UbbP0CG49 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UbbP0CG49 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UbbP0CG49 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
UbbP0CG49 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UbbP0CG49 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UbbP0CG49 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UbbP0CG49 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UbbP0CG49 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UbbP0CG49 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UbbP0CG49 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UbbP0CG49 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UbbP0CG49 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UbbP0CG49 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UbbP0CG49 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.43■□□□□ 0.7
UbbP0CG49 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.43■□□□□ 0.7
UbbP0CG49 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UbbP0CG49 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UbbP0CG49 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UbbP0CG49 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UbbP0CG49 Nkain2-201ENSMUST00000092602 558 ntBASIC19.42■□□□□ 0.7
UbbP0CG49 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
UbbP0CG49 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UbbP0CG49 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
UbbP0CG49 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UbbP0CG49 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UbbP0CG49 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UbbP0CG49 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UbbP0CG49 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
UbbP0CG49 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UbbP0CG49 Gm37136-201ENSMUST00000194368 194 ntBASIC19.4■□□□□ 0.7
UbbP0CG49 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UbbP0CG49 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.4■□□□□ 0.7
UbbP0CG49 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UbbP0CG49 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
UbbP0CG49 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
UbbP0CG49 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
UbbP0CG49 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UbbP0CG49 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
UbbP0CG49 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UbbP0CG49 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UbbP0CG49 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
UbbP0CG49 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UbbP0CG49 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
UbbP0CG49 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UbbP0CG49 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UbbP0CG49 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UbbP0CG49 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
UbbP0CG49 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UbbP0CG49 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UbbP0CG49 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UbbP0CG49 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UbbP0CG49 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UbbP0CG49 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UbbP0CG49 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.36■□□□□ 0.69
UbbP0CG49 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UbbP0CG49 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UbbP0CG49 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UbbP0CG49 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.36■□□□□ 0.69
UbbP0CG49 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UbbP0CG49 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
UbbP0CG49 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UbbP0CG49 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UbbP0CG49 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.34■□□□□ 0.69
UbbP0CG49 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UbbP0CG49 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
UbbP0CG49 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UbbP0CG49 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UbbP0CG49 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.33■□□□□ 0.69
UbbP0CG49 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UbbP0CG49 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
UbbP0CG49 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UbbP0CG49 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.32■□□□□ 0.68
UbbP0CG49 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UbbP0CG49 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.32■□□□□ 0.68
UbbP0CG49 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UbbP0CG49 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UbbP0CG49 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UbbP0CG49 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
UbbP0CG49 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UbbP0CG49 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
UbbP0CG49 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UbbP0CG49 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UbbP0CG49 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UbbP0CG49 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms