Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TcraP01849 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.36■□□□□ 0.21
TcraP01849 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TcraP01849 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TcraP01849 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TcraP01849 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TcraP01849 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TcraP01849 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TcraP01849 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TcraP01849 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TcraP01849 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TcraP01849 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TcraP01849 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.34■□□□□ 0.21
TcraP01849 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TcraP01849 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TcraP01849 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TcraP01849 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TcraP01849 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TcraP01849 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TcraP01849 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TcraP01849 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TcraP01849 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TcraP01849 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TcraP01849 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TcraP01849 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TcraP01849 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TcraP01849 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TcraP01849 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TcraP01849 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TcraP01849 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TcraP01849 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TcraP01849 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TcraP01849 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TcraP01849 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TcraP01849 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TcraP01849 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TcraP01849 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TcraP01849 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TcraP01849 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TcraP01849 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.28■□□□□ 0.2
TcraP01849 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TcraP01849 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TcraP01849 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
TcraP01849 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TcraP01849 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TcraP01849 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TcraP01849 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TcraP01849 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.27■□□□□ 0.2
TcraP01849 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TcraP01849 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TcraP01849 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TcraP01849 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TcraP01849 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TcraP01849 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TcraP01849 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TcraP01849 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TcraP01849 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TcraP01849 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TcraP01849 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TcraP01849 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TcraP01849 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TcraP01849 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.25■□□□□ 0.19
TcraP01849 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TcraP01849 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TcraP01849 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TcraP01849 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TcraP01849 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TcraP01849 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.24■□□□□ 0.19
TcraP01849 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TcraP01849 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TcraP01849 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TcraP01849 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TcraP01849 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TcraP01849 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TcraP01849 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
TcraP01849 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.22■□□□□ 0.19
TcraP01849 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Zfp131-205ENSMUST00000223812 663 ntBASIC16.22■□□□□ 0.19
TcraP01849 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.22■□□□□ 0.19
TcraP01849 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.22■□□□□ 0.19
TcraP01849 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.22■□□□□ 0.19
TcraP01849 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TcraP01849 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TcraP01849 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TcraP01849 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TcraP01849 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TcraP01849 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.21■□□□□ 0.19
TcraP01849 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TcraP01849 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TcraP01849 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TcraP01849 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.21■□□□□ 0.19
TcraP01849 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms