Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Abcd4O89016 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Abcd4O89016 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Abcd4O89016 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Abcd4O89016 Terc-201ENSMUST00000082862 423 ntBASIC20.23■□□□□ 0.83
Abcd4O89016 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.23■□□□□ 0.83
Abcd4O89016 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.22■□□□□ 0.83
Abcd4O89016 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Abcd4O89016 Gm14523-201ENSMUST00000117260 558 ntBASIC20.22■□□□□ 0.83
Abcd4O89016 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcd4O89016 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Abcd4O89016 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Abcd4O89016 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abcd4O89016 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.21■□□□□ 0.83
Abcd4O89016 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Abcd4O89016 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Abcd4O89016 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abcd4O89016 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abcd4O89016 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Abcd4O89016 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Abcd4O89016 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd4O89016 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd4O89016 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abcd4O89016 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcd4O89016 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.18■□□□□ 0.82
Abcd4O89016 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcd4O89016 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.18■□□□□ 0.82
Abcd4O89016 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abcd4O89016 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Abcd4O89016 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.17■□□□□ 0.82
Abcd4O89016 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.17■□□□□ 0.82
Abcd4O89016 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Abcd4O89016 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.17■□□□□ 0.82
Abcd4O89016 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abcd4O89016 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abcd4O89016 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abcd4O89016 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Abcd4O89016 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Abcd4O89016 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd4O89016 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd4O89016 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd4O89016 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd4O89016 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd4O89016 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd4O89016 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Abcd4O89016 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd4O89016 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.15■□□□□ 0.82
Abcd4O89016 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abcd4O89016 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Abcd4O89016 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Abcd4O89016 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Abcd4O89016 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Abcd4O89016 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcd4O89016 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcd4O89016 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.13■□□□□ 0.81
Abcd4O89016 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcd4O89016 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcd4O89016 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Abcd4O89016 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abcd4O89016 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Abcd4O89016 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Abcd4O89016 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.12■□□□□ 0.81
Abcd4O89016 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.12■□□□□ 0.81
Abcd4O89016 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.12■□□□□ 0.81
Abcd4O89016 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Abcd4O89016 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcd4O89016 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Abcd4O89016 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.11■□□□□ 0.81
Abcd4O89016 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcd4O89016 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Abcd4O89016 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcd4O89016 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Abcd4O89016 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abcd4O89016 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abcd4O89016 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Abcd4O89016 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Abcd4O89016 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abcd4O89016 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abcd4O89016 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Abcd4O89016 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcd4O89016 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcd4O89016 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcd4O89016 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.09■□□□□ 0.81
Abcd4O89016 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abcd4O89016 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abcd4O89016 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abcd4O89016 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abcd4O89016 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abcd4O89016 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abcd4O89016 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.08■□□□□ 0.81
Abcd4O89016 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Abcd4O89016 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.08■□□□□ 0.81
Abcd4O89016 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.08■□□□□ 0.8
Abcd4O89016 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Abcd4O89016 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Abcd4O89016 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcd4O89016 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Abcd4O89016 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcd4O89016 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abcd4O89016 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms